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rifcsphigho2_02_scaffold_9231

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_9231_1
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

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1..999
DNA (999bp) protein (333aa)
phosphonate ABC transporter substrate-binding protein; K02044 phosphonate transport system substrate-binding protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
Phosphonate ABC transporter substrate-binding protein id=3475381 bin=GWA2_OP3_52_12 species=Paenibacillus sp. Aloe-11 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
phosphonate ABC transporter substrate-binding protein
rifcsphigho2_02_scaffold_9231_2
BJP_IG2158_Planctomycetes_45_10, Phycisphaerae, Planctomycetes, Bacteria

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1203..1934
DNA (732bp) protein (244aa)
Methylase involved in ubiquinone/menaquinone biosynthesis id=16960852 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=BJP_IG2158_Planctomycetes_45_10
rifcsphigho2_02_scaffold_9231_3
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1931..2659
DNA (729bp) protein (243aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;
Phosphodiesterase, MJ0936 family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FN54_9FIRM
phosphodiesterase, MJ0936 family
rifcsphigho2_02_scaffold_9231_4
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

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2661..3434
DNA (774bp) protein (258aa)
phnC; phosphonate ABC transporter, ATP-binding protein (EC:3.6.3.28) Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
Phosphonates import ATP-binding protein PhnC n=1 Tax=Haloplasma contractile SSD-17B RepID=F7Q148_9BACT
phnC; phosphonate ABC transporter ATP-binding protein
rifcsphigho2_02_scaffold_9231_5
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

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3437..4231
DNA (795bp) protein (265aa)
phosphonate ABC transporter permease; K02042 phosphonate transport system permease protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
Phosphonate ABC transporter, inner membrane subunit id=3475385 bin=GWA2_OP3_52_12 species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
phosphonate ABC transporter permease
rifcsphigho2_02_scaffold_9231_6
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

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4274..4966
DNA (693bp) protein (231aa)
nucleotidyl transferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
Glucose-1-phosphate cytidylyltransferase id=3475387 bin=GWA2_OP3_52_12 species=Pseudomonas sp. HPB0071 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
nucleotidyl transferase
rifcsphigho2_02_scaffold_9231_7

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5096..5761
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SG56_9BACT id=5103369 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62650.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_9231_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(5797..6726)
DNA (930bp) protein (310aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=AR11
NAD-dependent epimerase/dehydratase id=1812855 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
NAD-dependent epimerase/dehydratase family protein
rifcsphigho2_02_scaffold_9231_9
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(6728..7459)
DNA (732bp) protein (244aa)
gcd1; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Nucleotidyl transferase n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PCA3_9FIRM
Nucleotidyl transferase Tax=GWA2_OD1_40_9
rifcsphigho2_02_scaffold_9231_10
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

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comp(7465..8757)
DNA (1293bp) protein (431aa)
ugd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
ugd; UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] id=7201492 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
nsd; UDP-glucose 6-dehydrogenase
rifcsphigho2_02_scaffold_9231_11
unknown

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9207..9464
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9231_12
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9424..10545)
DNA (1122bp) protein (374aa)
RNA-binding protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMA9_THEBM
fibronectin-binding a domain protein Tax=CG_Woesearch_02
RNA-binding protein
rifcsphigho2_02_scaffold_9231_13
Smithella sp. F21, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10580..12439)
DNA (1860bp) protein (620aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E681A
phosphoenolpyruvate carboxykinase
rifcsphigho2_02_scaffold_9231_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(12452..13171)
DNA (720bp) protein (240aa)
aspB1; aspartate aminotransferase AspB (EC:2.6.1.1)
Aspartate aminotransferase AspB n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0U9_CLOA9
aspartate/tyrosine/aromatic aminotransferase Tax=RBG_13_Bathyarchaeota_38_9_curated
Displaying 14 items

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