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rifcsphigho2_02_scaffold_9470

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_9470_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3..3164)
DNA (3162bp) protein (1054aa)
peptidase S8/S53 subtilisin kexin sedolisin Tax=CG_Woesearch_02
hypothetical protein id=5048115 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_9470_2

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comp(3767..5179)
DNA (1413bp) protein (471aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN53900.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=8267058 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
rifcsphigho2_02_scaffold_9470_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(5219..5641)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI000374DB56
archease Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsphigho2_02_scaffold_9470_4

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5888..7783
DNA (1896bp) protein (632aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1579371 species="Archaea.;"
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Thermincola potens (strain JR) RepID=D5X8C5_THEPJ
rifcsphigho2_02_scaffold_9470_5
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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7793..8047
DNA (255bp) protein (85aa)
Uncharacterized protein id=4177527 bin=GWA2_Bacteroidetes_33_15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
Cystinosin/ERS1p repeat protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
rifcsphigho2_02_scaffold_9470_6
CG_Woesearch_02, Woesearchaeota, Archaea

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8260..8976
DNA (717bp) protein (239aa)
30S ribosomal protein S3Ae Tax=CG_Woesearch_02
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SSU ribosomal protein S3AE
rifcsphigho2_02_scaffold_9470_7
RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

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9266..9841
DNA (576bp) protein (192aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6) Tax=RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated
Metal dependent phosphohydrolase id=4845854 bin=PER_GWC2_41_7 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
metal dependent phosphohydrolase
rifcsphigho2_02_scaffold_9470_8
CG_Woesearch_02, Woesearchaeota, Archaea

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9894..10493
DNA (600bp) protein (200aa)
O-sialoglycoprotein endopeptidase; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=CG_Woesearch_02
O-sialoglycoprotein endopeptidase id=5800366 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_9470_9
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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10490..11200
DNA (711bp) protein (237aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Putative phosphorylated carbohydrates phosphatase id=3327403 bin=GWA1_Kazan_50_15 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:ENO11766.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales arch
rifcsphigho2_02_scaffold_9470_10
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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11406..11783
DNA (378bp) protein (126aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=201089 species="Bacteria; Pr
phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19)
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YLC7_9DELT
rifcsphigho2_02_scaffold_9470_11
R_WOR_2_41_12, WOR-2, Bacteria

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11785..12666
DNA (882bp) protein (294aa)
hisG; ATP phosphoribosyltransferase; K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase id=3210957 bin=GWF2_Lentisphaerae_49_21 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
rifcsphigho2_02_scaffold_9470_12
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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12672..13940
DNA (1269bp) protein (423aa)
hisD; Histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Methanobacterium sp. MB1 RepID=U6EB32_9EURY rbh
rifcsphigho2_02_scaffold_9470_13
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

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13933..15000
DNA (1068bp) protein (356aa)
histidinol phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFOXYB2_FULL_RIF07_49_35_curated
histidinol phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase id=3327399 bin=GWA1_Kazan_50_15 species=ACD17 genus=ACD17 taxon_order=ACD17 taxon_class=ACD17 phylum=Clamydiae tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
rifcsphigho2_02_scaffold_9470_14
Campylobacter curvus, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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14997..15791
DNA (795bp) protein (265aa)
histidinol-phosphate phosphatase n=1 Tax=Campylobacter curvus RepID=UPI0003714351
histidinol phosphate phosphatase, HisJ
Histidinol phosphate phosphatase, HisJ {ECO:0000313|EMBL:EAU01279.1}; TaxID=360105 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" sou
rifcsphigho2_02_scaffold_9470_15
CG_CPR10_03, CG_CPR10, Bacteria

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15800..16387
DNA (588bp) protein (196aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=CG_CPR10_03
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase id=3327397 bin=GWA1_Kazan_50_15 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
rifcsphigho2_02_scaffold_9470_16

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16452..16961
DNA (510bp) protein (170aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (EC:2.4.2.-)
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit id=3327395 bin=GWA1_Kazan_50_15 species=[Ruminococcus] gnavus genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
rifcsphigho2_02_scaffold_9470_17
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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16946..17710
DNA (765bp) protein (255aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF id=3327392 bin=GWA1_Kazan_50_15 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
hisF; imidazoleglycerol phosphate synthase cyclase subunit
rifcsphigho2_02_scaffold_9470_18
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

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17707..18399
DNA (693bp) protein (231aa)
phosphoribosyl-ATP diphosphatase (EC:5.3.1.16 3.5.4.19) Tax=GWF2_Melainabacteria_37_15_curated
Phosphoribosyl-ATP diphosphatase id=3327390 bin=GWA1_Kazan_50_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
phosphoribosyl-ATP diphosphatase
rifcsphigho2_02_scaffold_9470_19
unknown

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18514..18798
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9470_20
unknown

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18788..19105
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9470_21

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19197..19421
DNA (225bp) protein (75aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5045800 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1579365 species="Archaea.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
rifcsphigho2_02_scaffold_9470_22

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19435..20460
DNA (1026bp) protein (342aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5045800 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1579365 species="Archaea.;"
Histidine-tRNA ligase
rifcsphigho2_02_scaffold_9470_23
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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comp(20781..22613)
DNA (1833bp) protein (611aa)
Trichohyalin, putative n=1 Tax=Trichomonas vaginalis RepID=A2FHD4_TRIVA
Trichohyalin, putative {ECO:0000313|EMBL:EAX95692.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
SMC domain protein
Displaying 23 items

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