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rifcsphigho2_02_scaffold_7236

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7236_1
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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98..532
DNA (435bp) protein (145aa)
MarR family transcriptional regulator (EC:2.7.1.161)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-R
Riboflavin kinase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX73_FERPA
rifcsphigho2_02_scaffold_7236_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

529..990
DNA (462bp) protein (154aa)
riboflavin synthase (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=AR11
ribC; riboflavin synthase subunit alpha (EC:2.5.1.-)
Riboflavin synthase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAL4_METCZ
rifcsphigho2_02_scaffold_7236_3
RLO_WOR_2_51_24, WOR-2, Bacteria

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935..1528
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MR28_9BACT
phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
rifcsphigho2_02_scaffold_7236_4
Sulfolobales archaeon AZ1, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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1531..1947
DNA (417bp) protein (139aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYK4_METFV
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
rifcsphigho2_02_scaffold_7236_5
unknown

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1987..3603
DNA (1617bp) protein (539aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7236_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3822..4610)
DNA (789bp) protein (263aa)
id=5042250 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsphigho2_02_scaffold_7236_7
Parcubacteria bacterium GW2011_GWF1_40_5, Parcubacteria, Bacteria

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comp(4666..5085)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BES3_PETMO
Uncharacterized protein {ECO:0000313|EMBL:KKR65098.1}; TaxID=1618955 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_40_5.;"
hypothetical protein
rifcsphigho2_02_scaffold_7236_8
CG_Woesearch_02, Woesearchaeota, Archaea

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5212..6693
DNA (1482bp) protein (494aa)
hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5799954 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_7236_9
unknown

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6695..6925
DNA (231bp) protein (77aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7236_10

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6968..8068
DNA (1101bp) protein (367aa)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase id=5800817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_7236_11
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

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comp(8083..9084)
DNA (1002bp) protein (334aa)
K+-dependent Na+/Ca+ exchanger related-protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
CaCA family Na+/Ca+ antiporter; K07301 inner membrane protein id=5084639 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
K+-dependent Na+/Ca+ exchanger related-protein
rifcsphigho2_02_scaffold_7236_12
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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comp(9148..9960)
DNA (813bp) protein (271aa)
UROD/MetE-like Tax=RBG_13_Planctomycetes_50_24_curated
UROD/MetE-like id=5803145 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rifcsphigho2_02_scaffold_7236_13

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10203..10520
DNA (318bp) protein (106aa)
Elongation factor 1-beta id=5799999 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=157937
Elongation factor 1-beta
rifcsphigho2_02_scaffold_7236_14
Thermococcus sp. AM4, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(10517..11323)
DNA (807bp) protein (269aa)
Protein kinase n=1 Tax=Thermococcus sp. AM4 RepID=B7R0N0_9EURY
protein kinase
Protein kinase {ECO:0000313|EMBL:EEB74554.2}; TaxID=246969 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sp. AM4.;"
rifcsphigho2_02_scaffold_7236_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(11340..12548)
DNA (1209bp) protein (403aa)
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32); K00555 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] Tax=CG_Woesearch_02
tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase id=5800001 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
N(2),N(2)-dimethylguanosine tRNA methyltransferase
rifcsphigho2_02_scaffold_7236_16
unknown

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comp(12589..12930)
DNA (342bp) protein (114aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7236_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13049..14809
DNA (1761bp) protein (587aa)
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Woesearch_02
Probable translation initiation factor IF-2 id=5800003 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative translation initiation factor IF-2
rifcsphigho2_02_scaffold_7236_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15214..15675
DNA (462bp) protein (154aa)
hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5800004 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_7236_19
unknown

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comp(15656..16492)
DNA (837bp) protein (279aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7236_20
unknown

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comp(16625..17773)
DNA (1149bp) protein (383aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7236_21
unknown

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comp(17810..19273)
DNA (1464bp) protein (488aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7236_22

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comp(19439..19981)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NFA3_METST
Marine sediment metagenome DNA, contig: S03H2_L07269 {ECO:0000313|EMBL:GAH39901.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsphigho2_02_scaffold_7236_23
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(20060..20299)
DNA (240bp) protein (80aa)
hypothetical protein
id=5800009 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_7236_24
CG_Woesearch_02, Woesearchaeota, Archaea

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20355..21257
DNA (903bp) protein (301aa)
ATP-binding protein (EC:6.3.5.4)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003753E03
ATP binding protein Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_7236_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21260..22387)
DNA (1128bp) protein (376aa)
small GTP-binding protein; K06944 Tax=CG_Woesearch_02
GTP-binding protein id=5799709 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
small GTP-binding protein
rifcsphigho2_02_scaffold_7236_26

Not on your lists


22698..23543
DNA (846bp) protein (282aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5049223 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45214.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
rifcsphigho2_02_scaffold_7236_27
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


23546..24808
DNA (1263bp) protein (421aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Therm
ribosomal protein L10
rifcsphigho2_02_scaffold_7236_28
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

24905..25219
DNA (315bp) protein (105aa)
50S ribosomal protein L12P Tax=AR11
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5045961 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl12p; 50S ribosomal protein L12
rifcsphigho2_02_scaffold_7236_29
CG_Woesearch_02, Woesearchaeota, Archaea

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25476..26390
DNA (915bp) protein (305aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=CG_Woesearch_02
hypothetical protein id=5047527 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_7236_30
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(26404..26589)
DNA (186bp) protein (62aa)
30S ribosomal protein S27ae n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=RS27A_THEGJ
rps27AE; 30S ribosomal protein S27ae
30S ribosomal protein S27ae {ECO:0000255|HAMAP-Rule:MF_00777}; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus gammatol
Displaying items 1-30 of 36 in total

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