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rifcsphigho2_02_scaffold_1874

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1874_1
unknown

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2..136
DNA (135bp) protein (45aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1874_2
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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190..924
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Clostridium sporogenes PA 3679 RepID=G9F3L9_CLOSG
Putative uncharacterized protein {ECO:0000313|EMBL:EHN13949.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA
WbqC-like family protein
rifcsphigho2_02_scaffold_1874_3
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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948..1931
DNA (984bp) protein (328aa)
Glycosyl transferase, family 2 id=3489396 bin=GWC2_Bacteroidetes_40_13 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
glycosyltransferase domain-containing protein
Glycosyltransferase domain containing protein {ECO:0000313|EMBL:AAK80283.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium a
rifcsphigho2_02_scaffold_1874_4

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comp(2384..2959)
DNA (576bp) protein (192aa)
hypothetical protein id=5045915 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46260.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
glycosyl transferase
rifcsphigho2_02_scaffold_1874_5
R_OD1_Nomurabacteria_36_29, Nomurabacteria, Parcubacteria, Bacteria

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comp(2956..3678)
DNA (723bp) protein (241aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CY91_9ARCH
dTDP-4-dehydrorhamnose reductase Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated
dTDP-4-dehydrorhamnose reductase
rifcsphigho2_02_scaffold_1874_6
CG_Omnitr_04, Omnitrophica, Bacteria

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3754..6441
DNA (2688bp) protein (896aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCQ2_DICT6 rbh
lipopolysaccharide biosynthesis protein Tax=CG_Omnitr_04
lipopolysaccharide biosynthesis protein
rifcsphigho2_02_scaffold_1874_7
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

6526..7983
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362EC4C
radical SAM domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_1874_8
R_RIF_OD1_06_43_17b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(8005..8907)
DNA (903bp) protein (301aa)
putative uDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_43_17b_curated
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U1F6_9EURY
NAD-dependent epimerase/dehydratase
rifcsphigho2_02_scaffold_1874_9

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comp(8904..9266)
DNA (363bp) protein (121aa)
Dihydropteroate synthase-related protein id=5800740 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Dihydropteroate synthase-related protein {ECO:0000313|EMBL:AJF62070.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
dihydropteroate synthase-like protein
rifcsphigho2_02_scaffold_1874_10
Caldithrix abyssi, Caldithrix, Bacteria

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comp(9293..10399)
DNA (1107bp) protein (369aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XS93_9BACT
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EHO40257.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
UDP-N-acetylglucosamine 2-epimerase
rifcsphigho2_02_scaffold_1874_11
GWA2_RIF03_38_11_curated, RIF3, Bacteria

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10476..11636
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SYU7_META2
hypothetical protein Tax=GWA2_RIF03_38_11_curated
hypothetical protein
rifcsphigho2_02_scaffold_1874_12
RBG_13_OP11_Beckwithbacteria_42_9_curated, Beckwithbacteria, Microgenomates, Bacteria

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comp(11846..12772)
DNA (927bp) protein (309aa)
Aminoglycoside N3'-acetyltransferase; K00662 aminoglycoside N3'-acetyltransferase [EC:2.3.1.81] Tax=RBG_13_OP11_Beckwithbacteria_42_9_curated
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002D52BA1
Aminoglycoside N3'-acetyltransferase
rifcsphigho2_02_scaffold_1874_13
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(12769..13518)
DNA (750bp) protein (250aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
3-oxoacyl-(acyl-carrier-protein) reductase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000288B54F
MaoC domain-containing protein dehydratase Tax=RBG_16_RIF03_38_10_curated
rifcsphigho2_02_scaffold_1874_14
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

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comp(13512..13946)
DNA (435bp) protein (145aa)
enoyl-CoA hydratase n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B5D520
MaoC domain-containing protein dehydratase Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
maoC like domain protein
rifcsphigho2_02_scaffold_1874_15
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

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comp(13949..14185)
DNA (237bp) protein (79aa)
phosphopantetheine-binding protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B4C449
acpA; acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_OD1_Wolfebacteria_41_13b_curated
hypothetical protein
rifcsphigho2_02_scaffold_1874_16
GWA2_OD1_37_10, Parcubacteria, Bacteria

Not on your lists

comp(14318..16150)
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289AFC2 rbh
hypothetical protein SclubSA_06235 Tax=GWA2_OD1_37_10
hypothetical protein
rifcsphigho2_02_scaffold_1874_17
RBG_13_OP11_Beckwithbacteria_42_9_curated, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(16147..16542)
DNA (396bp) protein (132aa)
phosphopantethiene-protein transferase domain-contain protein; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7] Tax=RBG_13_OP11_Beckwithbacteria_42_9_curated
4'-phosphopantetheinyl transferase id=4735759 bin=GWC2_OP3-like_45_7 species=Nitrosopumilus maritimus genus=Nitrosopumilus taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
phosphopantethiene-protein transferase domain-contain protein
rifcsphigho2_02_scaffold_1874_18
GWB2_Elusimicrobia_63_16_curated, Elusimicrobia, Bacteria

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16748..18238
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000347B1ED
Putative uncharacterized protein Tax=GWB2_Elusimicrobia_63_16_curated
hypothetical protein
rifcsphigho2_02_scaffold_1874_19
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(18257..19705)
DNA (1449bp) protein (483aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037039F7
radical SAM domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_1874_20

Not on your lists

19995..20717
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XMQ1_9BACT
Marine sediment metagenome DNA, contig: S01H1_S08048 {ECO:0000313|EMBL:GAG04409.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsphigho2_02_scaffold_1874_21
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

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comp(20754..21869)
DNA (1116bp) protein (372aa)
Predicted pyridoxal phosphate-dependent enzyme n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZ08_PELTS
WecE; pyridoxal phosphate-dependent enzyme Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
WecE; pyridoxal phosphate-dependent enzyme
rifcsphigho2_02_scaffold_1874_22
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

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comp(21877..22920)
DNA (1044bp) protein (348aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
rci:RCIX200 rfbB-1; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=95846 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
dTDP-glucose 4,6-dehydratase, dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
rifcsphigho2_02_scaffold_1874_23
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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comp(22896..23354)
DNA (459bp) protein (153aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_Aenigma_01
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme id=4039439 bin=GWF2_OP3_43_52 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
dTDP-4-dehydrorhamnose 3,5 epimerase
rifcsphigho2_02_scaffold_1874_24

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23645..25288
DNA (1644bp) protein (548aa)
polysaccharide biosynthesis protein CapF id=5045889 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Polysaccharide biosynthesis protein CapF {ECO:0000313|EMBL:KHO46234.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
polysaccharide biosynthesis protein
rifcsphigho2_02_scaffold_1874_25
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(25300..26430)
DNA (1131bp) protein (377aa)
Sulfatase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1T3_NITMS
sulfatase
Sulfatase {ECO:0000313|EMBL:ABX12054.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
rifcsphigho2_02_scaffold_1874_26
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(26446..27069)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BFQ7_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK61107.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus sulfaticall
rifcsphigho2_02_scaffold_1874_27
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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comp(27139..28473)
DNA (1335bp) protein (445aa)
sulfatase Tax=RBG_13_Aminicenantes_59_9_curated
sulfatase id=24398917 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative arylsulfatase
rifcsphigho2_02_scaffold_1874_28
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

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28646..29854
DNA (1209bp) protein (403aa)
Glycosyl transferase group 1 id=3682765 bin=GWF2_OP3_38_59 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
group 1 glycosyl transferase Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
Glycosyltransferase, family 1
rifcsphigho2_02_scaffold_1874_29

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comp(29922..31043)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00036B9AB6
amine oxidase
Amine oxidase {ECO:0000313|EMBL:AJF60167.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying 29 items

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