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rifcsphigho2_02_scaffold_5425_12

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: comp(10638..10901)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transferase family protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJM5_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 91.0
  • Bit_score: 82
  • Evalue 2.90e-13
lipopolysaccharide transferase family protein similarity KEGG
DB: KEGG
  • Identity: 44.0
  • Coverage: 91.0
  • Bit_score: 82
  • Evalue 4.80e-14

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Taxonomy

Methanosarcina sp. 1.H.T.1A.1 → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 264
TTGCCATATACGAGAGCATCGCAAAGCGGTGTGGCGCAGATTGCAGTTTCATATGGCAAGCCAGTTATCATAAGCAAAGTAGGTGGATTAAAAGAAACTCTACAAAATTATAATGGGGTATTTTTTGTTGAGCCAGGAAATAGCCAGCAAATAAGAGATAAGATTTTGGAATGCTTTAAGAAAAAAAACAAAAACTATGATTATAGCCTAGATTTGGGCGATGTCGCGATAAAATATAAAAACATACTCCAAAACGCATGTTAA
PROTEIN sequence
Length: 88
LPYTRASQSGVAQIAVSYGKPVIISKVGGLKETLQNYNGVFFVEPGNSQQIRDKILECFKKKNKNYDYSLDLGDVAIKYKNILQNAC*