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rifcsphigho2_02_scaffold_5425

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_5425_1
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(52..477)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380E9B4
transposase
rifcsphigho2_02_scaffold_5425_2
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

638..1096
-----------------
DNA (459bp)
protein (153aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037039F7
hypothetical protein
rifcsphigho2_02_scaffold_5425_3
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

1090..1275
-----------------
DNA (186bp)
protein (62aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037039F7
rifcsphigho2_02_scaffold_5425_4
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

1272..1943
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein id=3516329 bin=GWF2_Lentisphaerae_57_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_5425_5
unknown

Not on your lists

comp(1919..2080)
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5425_6
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(2026..3885)
-----------------
DNA (1860bp)
protein (620aa)
seg id=5800515 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
glycosyl transferase 39
rifcsphigho2_02_scaffold_5425_7
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(3875..5098)
-----------------
DNA (1224bp)
protein (408aa)
Glutamine--scyllo-inositol transaminase id=4375214 bin=GWF2_OP3_38_59 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
degT; pleiotropic regulatory protein DegT
rifcsphigho2_02_scaffold_5425_8
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

comp(5135..6502)
-----------------
DNA (1368bp)
protein (456aa)
Putative uncharacterized protein id=4237197 bin=GWF2_OP3_43_52 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
radical SAM protein
rifcsphigho2_02_scaffold_5425_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(6532..7767)
-----------------
DNA (1236bp)
protein (412aa)
Putative uncharacterized protein id=1889383 bin=GWD2_Bacteroidetes_40_43 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
polysaccharide biosynthesis protein
rifcsphigho2_02_scaffold_5425_10
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

7790..9202
-----------------
DNA (1413bp)
protein (471aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003652F88
radical SAM protein
rifcsphigho2_02_scaffold_5425_11
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

comp(9299..10636)
-----------------
DNA (1338bp)
protein (446aa)
Radical SAM domain protein id=2849318 bin=GWB1_CP_36_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
radical SAM protein
rifcsphigho2_02_scaffold_5425_12
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10638..10901)
-----------------
DNA (264bp)
protein (88aa)
Lipopolysaccharide transferase family protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJM5_METAC
lipopolysaccharide transferase family protein
rifcsphigho2_02_scaffold_5425_13
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

Not on your lists

comp(10934..12355)
-----------------
DNA (1422bp)
protein (474aa)
TPR domain-containing protein id=4114636 bin=GWF2_OP3_38_59 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Translation elongation factor P
rifcsphigho2_02_scaffold_5425_14
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12366..13484)
-----------------
DNA (1119bp)
protein (373aa)
Glycosyltransferase (EC:2.4.1.-)
Lipopolysaccharide transferase family protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FW7_METBF rbh
rifcsphigho2_02_scaffold_5425_15
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(13553..14968)
-----------------
DNA (1416bp)
protein (472aa)
hypothetical protein id=14426755 bin=bin1_lowGC species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
rifcsphigho2_02_scaffold_5425_16
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(14982..16463)
-----------------
DNA (1482bp)
protein (494aa)
Putative uncharacterized protein n=1 Tax=Cyanothece sp. CCY0110 RepID=A3IHC1_9CHRO id=5930 bin=ACD12 species=Cyanothece sp. CCY0110 genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
putative membrane protein (DUF2079)
rifcsphigho2_02_scaffold_5425_17
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(16515..18245)
-----------------
DNA (1731bp)
protein (577aa)
dolichyl-phosphate-mannose-protein mannosyltransferase (EC:2.4.1.109)
seg id=5800515 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_5425_18
RBG_13_WOR-2_44_8b_curated, WOR-2, Bacteria

Not on your lists

comp(18197..19888)
-----------------
DNA (1692bp)
protein (564aa)
Conserved uncharacterized protein id=4237083 bin=GWF2_OP3_43_52 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rifcsphigho2_02_scaffold_5425_19
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19881..21275)
-----------------
DNA (1395bp)
protein (465aa)
radical SAM domain protein id=125706 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
Fe-S oxidoreductase
rifcsphigho2_02_scaffold_5425_20
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

comp(21265..21621)
-----------------
DNA (357bp)
protein (119aa)
Glycosyl transferase, group 2 family protein, putative n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IG42_ACIB4
glycosyl transferase family 2
rifcsphigho2_02_scaffold_5425_21
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

21713..23116
-----------------
DNA (1404bp)
protein (468aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376477D
radical SAM domain-containing protein
Displaying 21 items

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