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rifcsphigho2_02_scaffold_5425_14

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: comp(12366..13484)

Top 3 Functional Annotations

Value Algorithm Source
Glycosyltransferase (EC:2.4.1.-) similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 373.0
  • Bit_score: 361
  • Evalue 3.00e-97
Lipopolysaccharide transferase family protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FW7_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 47.5
  • Coverage: 373.0
  • Bit_score: 361
  • Evalue 1.10e-96
  • rbh

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Taxonomy

Methanosarcina barkeri → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1119
ATGAACATAACCCTAATAGGTCCAAACAAAAAATTCCTTAGCGGAATAACATATTACACTATTAGACTAGCAAACGCTTTAAATAAGGAATATAAAATTTCTGCGATTACTATCAAAAACTTATTGCCAAAATTTCTATTTCCTGGTAAAAGCAGGGTGGGAAAGCAGCTTTCAGACTTAGAATTTGATAAAAATATCCCAATATGCGAATGTCTGGACTACTACATTTTTCCAGGCATCTTTGAAGCAGTAAACTTCCTAAAAAAACAGAATCCAGATGTAATAATAATGCAGTGGTGGTCAAGTTCTGCAGCTTTTAATTATTTGTTATTAAAAATAGCAAACAAATTATGTTTTAACAAAAAAATGATTATTGAGTTTCATGAAATTCTTGACCCTCTTGAGAACAACATGTGGCTTCTAAGGGTTTACGTAAAATTAATTTCAAAAATTTTGTTCAATAATCTGGATGCGTATGTTGTTCATTCTAATTATGACAGAGATATAATTCAGAAAGTATTTAATTTAAAGAAAGAAAAGGTATTTGTTGTTCCGCATGGCCCTTATAACCACTCTATTAAAGAAATAAAAATCAAAAAGAACAAAAATATATTTAATATATTGTTCTTTGGATTAATAAGAAACTATAAGGGGCTGGAATATCTGCTAGAAGCATTTAATAAAATCCCTCAAGAATTGATTGGCAATTTCAGATTGAATGTAGTAGGAGAAATCTGGGACAATAGGGAAAAGATATATTCCGCAATAGAAAATTCTAAGTATAGAGATAAGATAAAACTTATCAATAAGTATGTATCTGACGAAGATGTAAACAAGTATTTCACTTTGGCTGATGTTGTTGTTTTGCCATATACGAGAGCATCGCAAAGCGGTGTGGCGCAGATTGCAGTTTCATATGGCAAGCCAGTTATCATAAGCAAAGTAGGCGGATTAAAGGAGGCTCTCAAAAATTATAATGGGGCATTTTTTGTTGAGCCGAAAAACAATGAACAAATCAAGGATAAAATCATAAAAATATTTAATTTTAAAAGTAAAAAATTTAAAAATAGTAAATTCAATTGGGATATAACTGTTAATAAATATAAAATGTTATTTTAA
PROTEIN sequence
Length: 373
MNITLIGPNKKFLSGITYYTIRLANALNKEYKISAITIKNLLPKFLFPGKSRVGKQLSDLEFDKNIPICECLDYYIFPGIFEAVNFLKKQNPDVIIMQWWSSSAAFNYLLLKIANKLCFNKKMIIEFHEILDPLENNMWLLRVYVKLISKILFNNLDAYVVHSNYDRDIIQKVFNLKKEKVFVVPHGPYNHSIKEIKIKKNKNIFNILFFGLIRNYKGLEYLLEAFNKIPQELIGNFRLNVVGEIWDNREKIYSAIENSKYRDKIKLINKYVSDEDVNKYFTLADVVVLPYTRASQSGVAQIAVSYGKPVIISKVGGLKEALKNYNGAFFVEPKNNEQIKDKIIKIFNFKSKKFKNSKFNWDITVNKYKMLF*