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rifcsphigho2_02_scaffold_7236_32

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_35_18

near complete RP 40 / 55 MC: 6 BSCG 15 / 51 ASCG 33 / 38 MC: 4
Location: comp(27011..27196)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 61.0
  • Bit_score: 100
  • Evalue 7.30e-19
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5 similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 61.0
  • Bit_score: 100
  • Evalue 1.00e-18
DNA-directed RNA polymerase, subunit E similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 59.0
  • Bit_score: 82
  • Evalue 3.40e-14

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Taxonomy

Thermoplasmatales archaeon SCGC AB-539-C06 → Thermoplasmatales → Thermoplasmata → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 186
ATGAAAAAAAAAGTGTGTAAGAAGTGCAAGCTTTTTGTTGAAGGAGATATATGCCCTGTATGCAAAGGCAACCAGTTTTCAATAAACTGGCAGGGAAGATTATACATATTAGATGCAAACAAATCAACAATTGCAGATAAGATAGGAATAAAAGCAAAAGGAGAATATGCTATAAAATCCAGGTGA
PROTEIN sequence
Length: 62
MKKKVCKKCKLFVEGDICPVCKGNQFSINWQGRLYILDANKSTIADKIGIKAKGEYAIKSR*