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rifcsphigho2_02_scaffold_9559

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_9559_1
unknown

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88..927
-----------------
DNA (840bp)
protein (280aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9559_2
GWB2_OD1_ACD81_rel_46_69, Wolfebacteria, Parcubacteria, Bacteria

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comp(964..2082)
-----------------
DNA (1119bp)
protein (373aa)
amino acid ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein id=15189970 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:KKU40958.1}; TaxID=1619009 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium
extracellular ligand-binding receptor
rifcsphigho2_02_scaffold_9559_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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2163..2885
-----------------
DNA (723bp)
protein (241aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D6B10
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
Transcriptional regulator, TrmB
rifcsphigho2_02_scaffold_9559_4
unknown

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comp(2940..3833)
-----------------
DNA (894bp)
protein (298aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9559_5
unknown

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3966..4088
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9559_6
RLO_OD1_Nomurabacteria_41_10, Nomurabacteria, Parcubacteria, Bacteria

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4129..5358
-----------------
DNA (1230bp)
protein (410aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3)
NADH dehydrogenase (Ubiquinone) n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF05_THET1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_41_10_curated
rifcsphigho2_02_scaffold_9559_7

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5449..6168
-----------------
DNA (720bp)
protein (240aa)
DSBA oxidoreductase n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5N9_NITMS id=5103511 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO50907.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
DSBA oxidoreductase
rifcsphigho2_02_scaffold_9559_8

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6237..6629
-----------------
DNA (393bp)
protein (131aa)
transmembrane_regions 110..132 id=31599 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Uncharacterized protein {ECO:0000313|EMBL:EKD93093.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Vitamin K epoxide reductase
rifcsphigho2_02_scaffold_9559_9
unknown

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comp(6617..7060)
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9559_10
Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(7112..8197)
-----------------
DNA (1086bp)
protein (362aa)
hypothetical protein n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI00031817FB
AAA ATPase central domain-containing protein
AAA ATPase central domain protein {ECO:0000313|EMBL:ADQ45993.1}; TaxID=632348 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Cald
rifcsphigho2_02_scaffold_9559_11
unknown

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comp(8181..8447)
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9559_12
unknown

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comp(8440..8835)
-----------------
DNA (396bp)
protein (132aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9559_13

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comp(8819..9130)
-----------------
DNA (312bp)
protein (104aa)
ArsR family transcriptional regulator id=5044094 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHO54656.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
ArsR family transcriptional regulator
rifcsphigho2_02_scaffold_9559_14
unknown

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comp(9175..9555)
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9559_15
GWA2_OD1_38_13, Parcubacteria, Bacteria

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comp(9614..10141)
-----------------
DNA (528bp)
protein (176aa)
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:KKQ55941.1}; TaxID=1618811 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_38_13.;"
plastocyanin id=5085106 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
Blue (Type 1) copper protein
rifcsphigho2_02_scaffold_9559_16
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10155..11069)
-----------------
DNA (915bp)
protein (305aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_57_19_curated
thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VV76_CLOSH
rifcsphigho2_02_scaffold_9559_17
R_RIF_OD1_10_35_19, RIF-OD1-1, Parcubacteria, Bacteria

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comp(11154..11459)
-----------------
DNA (306bp)
protein (102aa)
glutaredoxin-like protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_10_35_19_curated
glutaredoxin-like protein
glutaredoxin-like protein id=5241603 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_9559_18
CG_PER_03, Peregrinibacteria, Bacteria

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11556..12191
-----------------
DNA (636bp)
protein (212aa)
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=CG_PER_03
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=3 Tax=Pyrococcus RepID=TPIS_PYRFU
rifcsphigho2_02_scaffold_9559_19
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

12192..12743
-----------------
DNA (552bp)
protein (184aa)
seg id=5800818 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
seg Tax=AR15
rifcsphigho2_02_scaffold_9559_20
unknown

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comp(12744..12905)
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

Displaying 20 items

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