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rifcsphigho2_02_scaffold_6258

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6258_1
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(3..842)
-----------------
DNA (840bp)
protein (280aa)
id=5046900 Tax=CG_Woesearch_01
id=5046900 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_6258_2
AR11, Woesearchaeaota, DPANN, Archaea

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comp(833..1951)
-----------------
DNA (1119bp)
protein (373aa)
hypothetical protein Tax=AR11
rifcsphigho2_02_scaffold_6258_3

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comp(2065..3045)
-----------------
DNA (981bp)
protein (327aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00035D1B7B
Marine sediment metagenome DNA, contig: S01H1_S07545 {ECO:0000313|EMBL:GAG13105.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
fibronectin type III protein
rifcsphigho2_02_scaffold_6258_4

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comp(3036..3266)
-----------------
DNA (231bp)
protein (77aa)
Marine sediment metagenome DNA, contig: S01H1_S07545 {ECO:0000313|EMBL:GAG13108.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_6258_5
AR11, Woesearchaeaota, DPANN, Archaea

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comp(3303..3818)
-----------------
DNA (516bp)
protein (172aa)
hypothetical protein Tax=AR11
id=5046898 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_6258_6

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comp(3854..4261)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO51630.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Putative uncharacterized protein id=5046897 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_6258_7
unknown

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comp(4254..4634)
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6258_8
CG_Micra_06, Micraarchaeota, Archaea

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comp(4634..5194)
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein Tax=CG_Micra_06
hypothetical protein
hypothetical protein id=5240903 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_6258_9
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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5323..6060
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUH4_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI60096.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola
rifcsphigho2_02_scaffold_6258_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6105..7370)
-----------------
DNA (1266bp)
protein (422aa)
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SPK6_9DELT
Adenosylhomocysteinase Tax=AR11
rifcsphigho2_02_scaffold_6258_11
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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7571..8002
-----------------
DNA (432bp)
protein (144aa)
Transcription regulator, Lrp/AsnC family n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A347_THESM
transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=GWA2_WOR_2_47_8_curated
Transcription regulator, Lrp/AsnC family
rifcsphigho2_02_scaffold_6258_12
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(7999..8898)
-----------------
DNA (900bp)
protein (300aa)
pfkB-3; ATP-dependent phosphofructokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15] Tax=GWA2_WOR_2_47_8_curated
pfkB-1; putative carbohydrate kinase, pfkB family (EC:2.7.1.15) id=5240851 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
rifcsphigho2_02_scaffold_6258_13
unknown

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comp(8973..9107)
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6258_14
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(9144..10154)
-----------------
DNA (1011bp)
protein (337aa)
phospholipase D/transphosphatidylase Tax=GWA2_WOR_2_47_8_curated
phospholipase D/transphosphatidylase id=5049210 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
phospholipase D/transphosphatidylase
rifcsphigho2_02_scaffold_6258_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10304..12079)
-----------------
DNA (1776bp)
protein (592aa)
serine protease-like protein; K06870 uncharacterized protein Tax=CG_Woesearch_02
serine protease; K06870 uncharacterized protein id=5049207 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Archaeal serine protease
rifcsphigho2_02_scaffold_6258_16
unknown

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comp(12121..13917)
-----------------
DNA (1797bp)
protein (599aa)
Surface layer protein B (SlgB-2) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28859_ARCFU Tax=AR20
Surface layer protein B (SlgB-2) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28859_ARCFU id=5103302 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Surface layer protein B SlgB-2
rifcsphigho2_02_scaffold_6258_17
unknown

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comp(13938..14615)
-----------------
DNA (678bp)
protein (226aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6258_18
unknown

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comp(14563..14919)
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6258_19

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comp(15033..17705)
-----------------
DNA (2673bp)
protein (891aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GXG9_FLAPJ
Outer membrane adhesin like protein proteiin {ECO:0000313|EMBL:KHO52075.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
PKD domain protein
Displaying 19 items

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