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rifcsphigho2_02_scaffold_4041

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_4041_1
AR11, Woesearchaeaota, DPANN, Archaea

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1..1338
-----------------
DNA (1338bp)
protein (446aa)
glutamyl-tRNA(Gln) amidotransferase subunit E; K03330 glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] id=5049650 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsphigho2_02_scaffold_4041_2

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1671..2543
-----------------
DNA (873bp)
protein (291aa)
coiled-coil id=5044027 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_4041_3
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2822..3169
-----------------
DNA (348bp)
protein (116aa)
ATP synthase H subunit n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP32_METZD
ATP synthase H subunit
rifcsphigho2_02_scaffold_4041_4
AR15, Woesearchaeaota, DPANN, Archaea

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3162..4997
-----------------
DNA (1836bp)
protein (612aa)
V-type ATPase 116 kDa subunit id=5800548 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Archaeal/vacuolar-type H+-ATPase subunit I
rifcsphigho2_02_scaffold_4041_5
AR15, Woesearchaeaota, DPANN, Archaea

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5089..5322
-----------------
DNA (234bp)
protein (78aa)
H(+)-transporting ATP synthase, subunit K id=5800549 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
H+-transporting two-sector ATPase, C subunit
rifcsphigho2_02_scaffold_4041_6

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5332..5877
-----------------
DNA (546bp)
protein (182aa)
H+transporting two-sector ATPase E subunit; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] id=5042344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
H+transporting two-sector ATPase E subunit
rifcsphigho2_02_scaffold_4041_7

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5879..6958
-----------------
DNA (1080bp)
protein (360aa)
ATP synthase A1 subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14] id=5042343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ATP synthase A1, C subunit
rifcsphigho2_02_scaffold_4041_8

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6964..7263
-----------------
DNA (300bp)
protein (100aa)
V-type ATP synthase subunit F; K02122 V-type H+-transporting ATPase subunit F [EC:3.6.3.14] id=5042342 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Vacuolar H+transporting two-sector ATPase F subunit
rifcsphigho2_02_scaffold_4041_9

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7265..8989
-----------------
DNA (1725bp)
protein (575aa)
ATP synthase subunit A (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] id=5042341 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpA; A(1)A(0)-type ATP synthase, subunit A (EC:3.6.3.14)
rifcsphigho2_02_scaffold_4041_10
unknown

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8992..9321
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4041_11

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9338..10708
-----------------
DNA (1371bp)
protein (457aa)
atpB-1; A-type ATP synthase subunit B (EC:3.6.3.14); K02118 V-type H+-transporting ATPase subunit B [EC:3.6.3.14] id=5042340 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpB; V-type H+-transporting ATPase subunit B (EC:3.6.3.14)
rifcsphigho2_02_scaffold_4041_12
RHI_OD1_Uhrbacteria_60_25, Uhrbacteria, Parcubacteria, Bacteria

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10779..11555
-----------------
DNA (777bp)
protein (259aa)
id=5098410 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_4041_13

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11565..12182
-----------------
DNA (618bp)
protein (206aa)
V-type ATPase subunit D; K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14] id=5042339 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpD; V-type ATP synthase subunit D (EC:3.6.3.14)
rifcsphigho2_02_scaffold_4041_14
unknown

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12182..12304
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4041_15
unknown

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comp(12362..12883)
-----------------
DNA (522bp)
protein (174aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4041_16

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13018..13371
-----------------
DNA (354bp)
protein (118aa)
id=5044649 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_4041_17

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13355..13594
-----------------
DNA (240bp)
protein (80aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C3AD8
rifcsphigho2_02_scaffold_4041_18
RLO_WOR_2_51_24, WOR-2, Bacteria

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13649..14839
-----------------
DNA (1191bp)
protein (397aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CHM3_KOSOT
rifcsphigho2_02_scaffold_4041_19

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14861..15532
-----------------
DNA (672bp)
protein (224aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D490
DNA binding protein
rifcsphigho2_02_scaffold_4041_20

Not on your lists

15640..16422
-----------------
DNA (783bp)
protein (261aa)
id=5047496 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_4041_21
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(16427..17758)
-----------------
DNA (1332bp)
protein (444aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000375227B
rifcsphigho2_02_scaffold_4041_22

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17825..20041
-----------------
DNA (2217bp)
protein (739aa)
hppA; K(+)-stimulated pyrophosphate-energized sodium pump (EC:3.6.1.1)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] id=5240751 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_4041_23
CG_Woesearch_02, Woesearchaeota, Archaea

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20087..20398
-----------------
DNA (312bp)
protein (104aa)
Ribonuclease P protein component 4 id=5799801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribonuclease P protein component 4
Displaying 23 items

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