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rifcsphigho2_02_scaffold_13923

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_13923_1
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(128..352)
-----------------
DNA (225bp)
protein (75aa)
hypothetical protein
AbrB/MazE/MraZ-like id=5240974 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_13923_2

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comp(446..1189)
-----------------
DNA (744bp)
protein (248aa)
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36); K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] id=5046750 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA (Adenine57-N1/adenine58-N1)-methyltransferase {ECO:0000313|EMBL:KHO45938.1}; EC=2.1.1.219 {ECO:0000313|EMBL:KHO45938.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
tRNA (adenine-N(1)-)-methyltransferase (EC:2.1.1.36)
rifcsphigho2_02_scaffold_13923_3
unknown

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comp(1286..1510)
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13923_trna_1
unknown

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comp(1688..1839)
-----------------
DNA (152bp)
transferRNA
rifcsphigho2_02_scaffold_13923_4
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1879..2829)
-----------------
DNA (951bp)
protein (317aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BHB1_THEXL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF17584.1}; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaeroba
rifcsphigho2_02_scaffold_13923_5
AR9, Woesearchaeaota, DPANN, Archaea

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comp(3018..4106)
-----------------
DNA (1089bp)
protein (363aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=AR9
DNA topoisomerase (ATP-hydrolyzing) n=4 Tax=Candidatus Parvarchaeum RepID=D2EGK9_9EURY id=5103234 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA topoisomerase ATP-hydrolyzing
rifcsphigho2_02_scaffold_13923_6
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4078..5742)
-----------------
DNA (1665bp)
protein (555aa)
DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=AR11
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
rifcsphigho2_02_scaffold_13923_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(5744..6289)
-----------------
DNA (546bp)
protein (182aa)
KH domain protein; K06961 ribosomal RNA assembly protein Tax=AR11
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative RNA-processing protein
rifcsphigho2_02_scaffold_13923_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(6340..7056)
-----------------
DNA (717bp)
protein (239aa)
Putative Serine/threonine protein kinase involved in cell cycle control (EC:2.7.11.1); K07178 RIO kinase 1 [EC:2.7.11.1] Tax=AR11
Non-specific serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] id=5048470 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Serine/threonine protein kinase involved in cell cycle control (EC:2.7.11.1)
rifcsphigho2_02_scaffold_13923_9
AR11, Woesearchaeaota, DPANN, Archaea

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7708..8955
-----------------
DNA (1248bp)
protein (416aa)
DNA primase Tax=AR11
UPF0095 protein Arcve_0273 id=5799947 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_13923_10
GWF2_OP11_38_6, Daviesbacteria, Microgenomates, Bacteria

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comp(8952..10049)
-----------------
DNA (1098bp)
protein (366aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ76423.1}; TaxID=1618432 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_6.;"
rifcsphigho2_02_scaffold_13923_11

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10168..10335
-----------------
DNA (168bp)
protein (56aa)
hypothetical protein
hypothetical protein; K06915 id=5048473 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45507.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Displaying 12 items

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