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rifcsphigho2_02_scaffold_34275

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_34275_1

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2..298
-----------------
DNA (297bp)
protein (99aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:KHO50308.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KHO50308.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E4E5_9GAMM
3-oxoacyl-(acyl-carrier-protein) reductase
rifcsphigho2_02_scaffold_34275_2

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409..768
-----------------
DNA (360bp)
protein (120aa)
hypothetical protein id=5046761 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45949.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_34275_3

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833..1360
-----------------
DNA (528bp)
protein (176aa)
2'-5' RNA ligase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RWJ4_FERPA
Marine sediment metagenome DNA, contig: S01H1_L00584 {ECO:0000313|EMBL:GAF84965.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
2'-5' RNA ligase
rifcsphigho2_02_scaffold_34275_4
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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1535..2134
-----------------
DNA (600bp)
protein (200aa)
30S ribosomal protein S2 Tax=GWA2_OD1_40_9
30S ribosomal protein S2
30S ribosomal protein S2 id=5799985 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hits to Archaea in NCBI not parcubacteria Cindy Castelle (7/29/17)
rifcsphigho2_02_scaffold_34275_5
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(2135..3112)
-----------------
DNA (978bp)
protein (326aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUI7_9BACT
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000313|EMBL:KKR78534.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
rifcsphigho2_02_scaffold_34275_6
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(3109..3741)
-----------------
DNA (633bp)
protein (211aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J8E7_FRASC
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=GWA2_OD1_40_9
phospholipid/glycerol acyltransferase
rifcsphigho2_02_scaffold_34275_7
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(3743..4387)
-----------------
DNA (645bp)
protein (215aa)
Phospholipid/glycerol acyltransferase n=2 Tax=Thermobifida fusca RepID=Q47R43_THEFY
Acyltransferase family protein Tax=GWA2_OD1_40_9
phospholipid/glycerol acyltransferase
rifcsphigho2_02_scaffold_34275_8

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comp(4471..5472)
-----------------
DNA (1002bp)
protein (334aa)
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5046762 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
radA; DNA repair and recombination protein RadA
rifcsphigho2_02_scaffold_34275_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(5517..5813)
-----------------
DNA (297bp)
protein (99aa)
hypothetical protein
id=5046763 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
id=5046763 Tax=RBG_13_Woesearchaeota_36_6_curated
Displaying 9 items

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