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rifcsphigho2_02_scaffold_11260

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_11260_1
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

1..234
-----------------
DNA (234bp)
protein (78aa)
rnz; ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5041812 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
elaC; ribonuclease Z (EC:3.1.26.11)
rifcsphigho2_02_scaffold_11260_2
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

236..625
-----------------
DNA (390bp)
protein (130aa)
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type id=5046341 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Resolvase, Holliday junction-type
rifcsphigho2_02_scaffold_11260_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(622..813)
-----------------
DNA (192bp)
protein (64aa)
seg id=5800104 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_11260_4

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comp(860..2212)
-----------------
DNA (1353bp)
protein (451aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=5050202 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_11260_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2250..2654
-----------------
DNA (405bp)
protein (135aa)
TOPRIM domain-containing protein id=5050201 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Toprim protein
rifcsphigho2_02_scaffold_11260_6
Pseudoalteromonas ruthenica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2716..3240)
-----------------
DNA (525bp)
protein (175aa)
rifcsphigho2_02_scaffold_11260_7
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

3374..4222
-----------------
DNA (849bp)
protein (283aa)
Protease HtpX homolog id=5799559 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
peptidase M48, Ste24p
rifcsphigho2_02_scaffold_11260_8
unknown

Not on your lists

comp(4219..5190)
-----------------
DNA (972bp)
protein (324aa)

This feature has no annotations

rifcsphigho2_02_scaffold_11260_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5227..7440)
-----------------
DNA (2214bp)
protein (738aa)
Hef nuclease; K10896 fanconi anemia group M protein id=5041753 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
fanconi anemia group M protein
rifcsphigho2_02_scaffold_11260_10

Not on your lists

comp(7519..7842)
-----------------
DNA (324bp)
protein (108aa)
rifcsphigho2_02_scaffold_11260_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7849..8619)
-----------------
DNA (771bp)
protein (257aa)
Peptidase M50 id=5041751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_11260_12

Not on your lists

comp(8666..9358)
-----------------
DNA (693bp)
protein (231aa)
TraB family protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSP1_METIM id=5103107 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TraB family protein
rifcsphigho2_02_scaffold_11260_13

Not on your lists

9472..9759
-----------------
DNA (288bp)
protein (96aa)
hypothetical protein
Putative uncharacterized protein id=5800011 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_11260_14

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comp(9756..10052)
-----------------
DNA (297bp)
protein (99aa)
id=5046309 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_11260_15
GWA2_OD1_51_10, Parcubacteria, Bacteria

Not on your lists

comp(10052..10339)
-----------------
DNA (288bp)
protein (96aa)
rifcsphigho2_02_scaffold_11260_trna_1
unknown

Not on your lists

10480..10605
-----------------
DNA (126bp)
transferRNA
rifcsphigho2_02_scaffold_11260_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

10650..11243
-----------------
DNA (594bp)
protein (198aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZW3_METMA
hypothetical protein
rifcsphigho2_02_scaffold_11260_17

Not on your lists

comp(11233..11742)
-----------------
DNA (510bp)
protein (170aa)
id=5046299 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying 18 items

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