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rifcsphigho2_02_scaffold_50538

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_50538_1

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comp(1..648)
DNA (648bp) protein (216aa)
Transketolase central region id=5799639 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transketolase central region {ECO:0000313|EMBL:AJF60970.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
transketolase, central region
rifcsphigho2_02_scaffold_50538_2

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comp(641..1702)
DNA (1062bp) protein (354aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha id=5799638 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:AJF60969.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_50538_3

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comp(1735..3042)
DNA (1308bp) protein (436aa)
Amino acid permease n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUD9_METCG id=5103485 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Amino acid transporter {ECO:0000313|EMBL:KHO53724.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Amino acid permease
rifcsphigho2_02_scaffold_50538_4
AR13, Pacearchaeaota, DPANN, Archaea

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comp(3051..3413)
DNA (363bp) protein (121aa)
Putative PIN domain protein id=4379347 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PIN domain-containing protein Tax=AR13
putative ribonuclease VapC
rifcsphigho2_02_scaffold_50538_5
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(3410..3664)
DNA (255bp) protein (85aa)
Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_50538_6
unknown

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3872..4126
DNA (255bp) protein (85aa)

This feature has no annotations

rifcsphigho2_02_scaffold_50538_7

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comp(4613..5014)
DNA (402bp) protein (134aa)
Probable lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}
Probable lipoyl synthase id=5799637 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
lipoate synthase
rifcsphigho2_02_scaffold_50538_8
AR4, Woesearchaeaota, DPANN, Archaea

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comp(5195..5953)
DNA (759bp) protein (253aa)
seg id=5044026 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsphigho2_02_scaffold_50538_9
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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comp(5998..6282)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEF6_DESAR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
hypothetical protein
rifcsphigho2_02_scaffold_50538_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6494..6817)
DNA (324bp) protein (108aa)
Tax=RBG_16_Ignavibacteria_34_14_curated
rifcsphigho2_02_scaffold_50538_11
unknown

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comp(7047..7313)
DNA (267bp) protein (89aa)

This feature has no annotations

rifcsphigho2_02_scaffold_50538_12
AR11, Woesearchaeaota, DPANN, Archaea

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comp(7397..7942)
DNA (546bp) protein (182aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=PYRI_PYRHO
Aspartate carbamoyltransferase regulatory chain Tax=AR11
rifcsphigho2_02_scaffold_50538_13

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comp(7943..8860)
DNA (918bp) protein (306aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1579371 species="Ar
pyrB; aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=5046261 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
aspartate carbamoyltransferase
Displaying 13 items

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