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rifcsphigho2_02_scaffold_20978

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_20978_1
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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1..939
DNA (939bp) protein (313aa)
Putative tpr repeat protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVL7_9BACT
Putative uncharacterized protein Tax=GWA2_OD1_40_9
hypothetical protein
rifcsphigho2_02_scaffold_20978_2
unknown

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989..1330
DNA (342bp) protein (114aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20978_3
AR11, Woesearchaeaota, DPANN, Archaea

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comp(1346..2125)
DNA (780bp) protein (260aa)
Tax=AR11
rifcsphigho2_02_scaffold_20978_4
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

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2742..3194
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Thermotoga naphthophila (strain ATCC BAA-489 / DSM 13996 / JCM 10882 / RKU-10) RepID=D2C8D8_THENR
hypothetical protein; K09005 hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
rifcsphigho2_02_scaffold_20978_5
unknown

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3234..3551
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20978_6
unknown

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3584..4015
DNA (432bp) protein (144aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20978_7
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(4093..4830)
DNA (738bp) protein (246aa)
Putative integrase bacteriophage 370.1 n=1 Tax=Carnobacterium sp. AT7 RepID=A8U834_9LACT
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
resolvase, N terminal domain protein
rifcsphigho2_02_scaffold_20978_8

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comp(5043..5600)
DNA (558bp) protein (186aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_L02580 {ECO:0000313|EMBL:GAF77674.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Helix-turn-helix, type 11 id=5043991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_20978_9

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comp(5674..6297)
DNA (624bp) protein (208aa)
Marine sediment metagenome DNA, contig: S01H1_L02580 {ECO:0000313|EMBL:GAF77680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_02_scaffold_20978_10
unknown

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6437..6712
DNA (276bp) protein (92aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20978_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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6763..7395
DNA (633bp) protein (211aa)
hypothetical protein; K07579 putative methylase Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein; K07579 putative methylase id=5047514 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA methylase
rifcsphigho2_02_scaffold_20978_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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7358..7696
DNA (339bp) protein (113aa)
RNA polymerase dimerization Tax=RBG_13_Woesearchaeota_36_6_curated
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA polymerase dimerization
rifcsphigho2_02_scaffold_20978_13
unknown

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7791..8054
DNA (264bp) protein (88aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20978_14
unknown

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8039..8218
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_20978_15

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8236..8943
DNA (708bp) protein (236aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5048456 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
undecaprenyl pyrophosphate synthetase
rifcsphigho2_02_scaffold_20978_16
CG_Woesearch_02, Woesearchaeota, Archaea

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9040..10461
DNA (1422bp) protein (474aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K07463 archaea-specific RecJ-like exonuclease Tax=CG_Woesearch_02
Phosphoesterase, RecJ-like protein
rifcsphigho2_02_scaffold_20978_17
AR4, Woesearchaeaota, DPANN, Archaea

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comp(10501..10770)
DNA (270bp) protein (90aa)
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
regulatory protein MarR Tax=AR4
hypothetical protein
rifcsphigho2_02_scaffold_20978_18
Danio rerio, Danio, Cypriniformes, Neopterygii, Chordata, Metazoa

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comp(11038..11826)
DNA (789bp) protein (263aa)
PREDICTED: apoptotic chromatin condensation inducer 1a isoform X4 n=1 Tax=Danio rerio RepID=UPI00038368DA
Uncharacterized protein {ECO:0000313|Ensembl:ENSDARP00000121592}; TaxID=7955 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariop
hypothetical protein
Displaying 18 items

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