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rifcsphigho2_02_scaffold_6108

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6108_1
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

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comp(1..429)
-----------------
DNA (429bp)
protein (143aa)
radical SAM domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Radical SAM domain protein id=4958421 bin=GWA2_Elusi_like_61_42 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_6108_2

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comp(543..1421)
-----------------
DNA (879bp)
protein (293aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003786BEA
Marine sediment metagenome DNA, contig: S06H3_S27120 {ECO:0000313|EMBL:GAI52668.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
radical SAM protein
rifcsphigho2_02_scaffold_6108_3
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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comp(1724..3154)
-----------------
DNA (1431bp)
protein (477aa)
radical SAM protein Tax=RBG_13_WOR_2_41_10_curated
Cobalamin B12-binding:Radical SAM id=4037289 bin=GWF2_Lentisphaerae_38_69 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
methyltransferase
rifcsphigho2_02_scaffold_6108_4
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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comp(3151..3870)
-----------------
DNA (720bp)
protein (240aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003643AE7
GtrA family protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
GtrA family protein
rifcsphigho2_02_scaffold_6108_5
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(4167..5138)
-----------------
DNA (972bp)
protein (324aa)
Uncharacterized protein n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IJ80_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM05318.1}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensi
rifcsphigho2_02_scaffold_6108_6
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(5182..7182)
-----------------
DNA (2001bp)
protein (667aa)
Type I phosphodiesterase/nucleotide pyrophosphatase id=1817484 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits rbh
Type I phosphodiesterase/nucleotide pyrophosphatase Tax=GWC2_Nitrospirae_57_13_curated
rifcsphigho2_02_scaffold_6108_7
CG_Woesearch_01, Woesearchaeota, Archaea

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7240..8190
-----------------
DNA (951bp)
protein (317aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=CG_Woesearch_01
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00035CC23E
rifcsphigho2_02_scaffold_6108_8
RIFOXYA2_FULL_WOR_1_36_21_curated, WOR-1, Bacteria

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comp(8197..8865)
-----------------
DNA (669bp)
protein (223aa)
Glycosyl transferase family protein n=1 Tax=mine drainage metagenome RepID=T1CAA7_9ZZZZ
hypothetical protein Tax=RIFOXYA2_FULL_WOR_1_36_21_curated
dolichol-phosphate mannosyltransferase
rifcsphigho2_02_scaffold_6108_9

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comp(8873..9409)
-----------------
DNA (537bp)
protein (179aa)
50S ribosomal protein L16; K02866 large subunit ribosomal protein L10e id=5044620 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Large subunit ribosomal protein L10e {ECO:0000313|EMBL:KHO46354.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rpl10e; 50S ribosomal protein L10e
rifcsphigho2_02_scaffold_6108_10

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9636..10037
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein; K09152 hypothetical protein id=5049200 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45191.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_6108_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10034..10435)
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein
hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5799558 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6108_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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10537..10998
-----------------
DNA (462bp)
protein (154aa)
Heat shock protein Hsp20 n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F193_SPICH
heat shock protein, Hsp20 family; K13993 HSP20 family protein Tax=RBG_13_Woesearchaeota_36_6_curated
heat shock protein Hsp20
rifcsphigho2_02_scaffold_6108_13

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10995..11537
-----------------
DNA (543bp)
protein (181aa)
Protein GrpE id=5799563 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Protein GrpE {ECO:0000313|EMBL:AJF60894.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
molecular chaperone GrpE
rifcsphigho2_02_scaffold_6108_14
CG_Woesearch_02, Woesearchaeota, Archaea

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11521..11877
-----------------
DNA (357bp)
protein (119aa)
seg Tax=CG_Woesearch_02
seg id=5799565 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_6108_15
CG_Woesearch_01, Woesearchaeota, Archaea

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11883..13739
-----------------
DNA (1857bp)
protein (619aa)
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Woesearch_01
Chaperone protein DnaK id=5799568 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
dnaK; molecular chaperone DnaK
rifcsphigho2_02_scaffold_6108_16

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13736..15313
-----------------
DNA (1578bp)
protein (526aa)
thermosome id=5043657 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thermosome {ECO:0000313|EMBL:KHO46633.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
GroL; HSP60 family chaperonin
rifcsphigho2_02_scaffold_6108_17
CG_Woesearch_02, Woesearchaeota, Archaea

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15314..16417
-----------------
DNA (1104bp)
protein (368aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=CG_Woesearch_02
Chaperone protein DnaJ id=5800476 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chaperone protein DnaJ
rifcsphigho2_02_scaffold_6108_18
unknown

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comp(16519..17100)
-----------------
DNA (582bp)
protein (194aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6108_19

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comp(17100..18569)
-----------------
DNA (1470bp)
protein (490aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase id=5799538 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
rifcsphigho2_02_scaffold_6108_20
unknown

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comp(18753..19118)
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

Displaying 20 items

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