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rifcsphigho2_02_scaffold_6710

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6710_1
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

comp(3..359)
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B104_9BACT
major facilitator superfamily protein Tax=BJP_IG2102_PER_44_74
major facilitator superfamily protein
rifcsphigho2_02_scaffold_6710_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(552..2309)
-----------------
DNA (1758bp)
protein (586aa)
pepF; oligoendopeptidase (EC:3.4.24.-)
Oligoendopeptidase, pepF/M3 family {ECO:0000313|EMBL:AFU57079.1}; EC=3.4.24.- {ECO:0000313|EMBL:AFU57079.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitros
Oligoendopeptidase, pepF/M3 family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILH2_NITGG
rifcsphigho2_02_scaffold_6710_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2417..2959
-----------------
DNA (543bp)
protein (181aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BFZ7_9RHIZ
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AGK59005.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source=
rifcsphigho2_02_scaffold_6710_4
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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3014..3382
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS11_PARL1
ybaA; hypothetical protein Tax=RBG_16_Zixibacteria_50_21_curated
hypothetical protein
rifcsphigho2_02_scaffold_6710_5

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comp(3372..4424)
-----------------
DNA (1053bp)
protein (351aa)
23S rRNA (uracil-5-)-methyltransferase id=5041726 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
23S rRNA (Uracil-5-)-methyltransferase {ECO:0000313|EMBL:KHO47978.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase
rifcsphigho2_02_scaffold_6710_6
S_OP1_64_32, KB1, Bacteria

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4848..6035
-----------------
DNA (1188bp)
protein (396aa)
Amylo-alpha-1,6-glucosidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYW3_RUBXD
Amylo-alpha-16-glucosidase Tax=S_OP1_64_32
amylo-alpha-1,6-glucosidase
rifcsphigho2_02_scaffold_6710_7
unknown

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6127..7179
-----------------
DNA (1053bp)
protein (351aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6710_8
AR20, Woesearchaeaota, DPANN, Archaea

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7220..9253
-----------------
DNA (2034bp)
protein (678aa)
hypothetical protein
id=5103815 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_6710_9
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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9220..9936
-----------------
DNA (717bp)
protein (239aa)
Uncharacterized protein AF_1947 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1947_ARCFU
Putative hemolysin
Putative hemolysin {ECO:0000313|EMBL:AIG98938.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus DSM 87
rifcsphigho2_02_scaffold_6710_10
CG_Woesearch_02, Woesearchaeota, Archaea

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10000..10422
-----------------
DNA (423bp)
protein (141aa)
Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_6710_11
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(10404..11057)
-----------------
DNA (654bp)
protein (218aa)
protein of unknown function (DUF1814)
Tax=AR19
rifcsphigho2_02_scaffold_6710_12

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comp(11044..11634)
-----------------
DNA (591bp)
protein (197aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54191.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
rifcsphigho2_02_scaffold_6710_13
unknown

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comp(11804..12694)
-----------------
DNA (891bp)
protein (297aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6710_14
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(12733..13317)
-----------------
DNA (585bp)
protein (195aa)
AMMECR1 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NWL4_9DELT
hypothetical protein; K06990 Tax=CG_Woesearch_03
AMMECR1
rifcsphigho2_02_scaffold_6710_15
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(13275..14336)
-----------------
DNA (1062bp)
protein (354aa)
[pyruvate formate-lyase]-activating enzyme (EC:1.97.1.4); K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=CG_Woesearch_03
Radical SAM domain protein n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UV02_SULAO
radical SAM protein
rifcsphigho2_02_scaffold_6710_16
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14514..15389
-----------------
DNA (876bp)
protein (292aa)
hypothetical protein Tax=CG_Delta_07
Uncharacterized protein id=5800436 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_6710_17
unknown

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15446..15658
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6710_18
unknown

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15655..15801
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

Displaying 18 items

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