ggKbase home page

rifcsphigho2_02_scaffold_6710

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_6710_1
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

comp(3..359)
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B104_9BACT
major facilitator superfamily protein
rifcsphigho2_02_scaffold_6710_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(552..2309)
-----------------
DNA (1758bp)
protein (586aa)
pepF; oligoendopeptidase (EC:3.4.24.-)
Oligoendopeptidase, pepF/M3 family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILH2_NITGG
rifcsphigho2_02_scaffold_6710_3
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2417..2959
-----------------
DNA (543bp)
protein (181aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BFZ7_9RHIZ
activator of Hsp90 ATPase 1 family protein
rifcsphigho2_02_scaffold_6710_4
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

3014..3382
-----------------
DNA (369bp)
protein (123aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS11_PARL1
hypothetical protein
rifcsphigho2_02_scaffold_6710_5

Not on your lists

comp(3372..4424)
-----------------
DNA (1053bp)
protein (351aa)
23S rRNA (uracil-5-)-methyltransferase id=5041726 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase
rifcsphigho2_02_scaffold_6710_6
S_OP1_64_32, KB1, Bacteria

Not on your lists

4848..6035
-----------------
DNA (1188bp)
protein (396aa)
Amylo-alpha-1,6-glucosidase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYW3_RUBXD
amylo-alpha-1,6-glucosidase
rifcsphigho2_02_scaffold_6710_7
unknown

Not on your lists

6127..7179
-----------------
DNA (1053bp)
protein (351aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6710_8
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

7220..9253
-----------------
DNA (2034bp)
protein (678aa)
hypothetical protein
id=5103815 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_6710_9
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

9220..9936
-----------------
DNA (717bp)
protein (239aa)
Uncharacterized protein AF_1947 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1947_ARCFU
Putative hemolysin
rifcsphigho2_02_scaffold_6710_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10000..10422
-----------------
DNA (423bp)
protein (141aa)
rifcsphigho2_02_scaffold_6710_11
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(10404..11057)
-----------------
DNA (654bp)
protein (218aa)
protein of unknown function (DUF1814)
rifcsphigho2_02_scaffold_6710_12

Not on your lists

comp(11044..11634)
-----------------
DNA (591bp)
protein (197aa)
rifcsphigho2_02_scaffold_6710_13
unknown

Not on your lists

comp(11804..12694)
-----------------
DNA (891bp)
protein (297aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6710_14
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(12733..13317)
-----------------
DNA (585bp)
protein (195aa)
AMMECR1 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NWL4_9DELT
AMMECR1
rifcsphigho2_02_scaffold_6710_15
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(13275..14336)
-----------------
DNA (1062bp)
protein (354aa)
Radical SAM domain protein n=1 Tax=Sulfurimonas autotrophica (strain ATCC BAA-671 / DSM 16294 / JCM 11897 / OK10) RepID=E0UV02_SULAO
radical SAM protein
rifcsphigho2_02_scaffold_6710_16
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14514..15389
-----------------
DNA (876bp)
protein (292aa)
Uncharacterized protein id=5800436 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_6710_17
unknown

Not on your lists

15446..15658
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6710_18
unknown

Not on your lists

15655..15801
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

Displaying 18 items

View Taxonomy