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rifcsphigho2_02_scaffold_4360

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4360_1
CG_Pacearch_05, Pacearchaeota, Archaea

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2..2791
-----------------
DNA (2790bp)
protein (930aa)
CARDB domain-containing protein Tax=CG_Pacearch_05
Putative uncharacterized protein id=4030499 bin=GWF2_Ignavibacteria_35_20 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
rifcsphigho2_02_scaffold_4360_2
unknown

Not on your lists

2794..3270
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4360_3

Not on your lists

comp(3282..3737)
-----------------
DNA (456bp)
protein (152aa)
Transcriptional regulator, lrp family n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8C4_9ARCH id=5103635 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcriptional regulator, lrp family
Transcriptional regulator, lrp family {ECO:0000313|EMBL:AJF62916.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_4360_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3956..4480
-----------------
DNA (525bp)
protein (175aa)
Tax=AR11
rifcsphigho2_02_scaffold_4360_5
AR11, Woesearchaeaota, DPANN, Archaea

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4477..5496
-----------------
DNA (1020bp)
protein (340aa)
Tax=AR11
rifcsphigho2_02_scaffold_4360_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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5493..6329
-----------------
DNA (837bp)
protein (279aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_4360_7
CG_Woesearch_02, Woesearchaeota, Archaea

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6352..8754
-----------------
DNA (2403bp)
protein (801aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Woesearch_02
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=uncultured archaeon RepID=D1J9A9_9ARCH
rifcsphigho2_02_scaffold_4360_8

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8914..9576
-----------------
DNA (663bp)
protein (221aa)
UPI0002893CB3 related cluster id=5044041 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46884.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_02_scaffold_4360_9
AR4, Woesearchaeaota, DPANN, Archaea

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9569..10726
-----------------
DNA (1158bp)
protein (386aa)
group 1 glycosyl transferase id=5044042 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
group 1 glycosyl transferase Tax=AR4
group 1 glycosyl transferase
rifcsphigho2_02_scaffold_4360_10
unknown

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10707..11090
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4360_11
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11121..11477
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R663_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV60758.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (st
rifcsphigho2_02_scaffold_4360_12
unknown

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11607..12347
-----------------
DNA (741bp)
protein (247aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4360_13
unknown

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12478..12735
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4360_14
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

12882..14186
-----------------
DNA (1305bp)
protein (435aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ESM5_METSB
acetyl-CoA acetyltransferase Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
fadB; multifunctional fatty acid oxidation complex subunit alpha
rifcsphigho2_02_scaffold_4360_15
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

14192..15349
-----------------
DNA (1158bp)
protein (386aa)
fatty oxidation complex, alpha subunit (EC:1.1.1.35 4.2.1.17); K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=CG_Elusi
fadB; enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Bacillus sp. 37MA RepID=UPI0003663E45
rifcsphigho2_02_scaffold_4360_16
RHI_OD1_Wolfebacteria_48_16, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

15354..16796
-----------------
DNA (1443bp)
protein (481aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3V1_9CLOT
acyl-CoA dehydrogenase domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_OD1_Wolfebacteria_48_16_curated
hypothetical protein
rifcsphigho2_02_scaffold_4360_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16796..17782
-----------------
DNA (987bp)
protein (329aa)
Beta-lactamase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MVK2_9EURY
Beta-lactamase {ECO:0000313|EMBL:EMA49626.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;
beta-lactamase
rifcsphigho2_02_scaffold_4360_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17786..18046)
-----------------
DNA (261bp)
protein (87aa)
RelE protein; K06218 RelE protein id=5050683 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RelE protein; K06218 RelE protein Tax=AR18
RelE protein
rifcsphigho2_02_scaffold_4360_19
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(18043..18282)
-----------------
DNA (240bp)
protein (80aa)
id=5050682 Tax=CG_Aenigma_01
id=5050682 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_4360_20
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18315..19247)
-----------------
DNA (933bp)
protein (311aa)
electron transfer flavoprotein, alpha subunit; K03522 electron transfer flavoprotein alpha subunit id=12556273 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:KJS13068.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium B
electron transfer flavoprotein subunit alpha
rifcsphigho2_02_scaffold_4360_21
unknown

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comp(19244..20023)
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

Displaying 21 items

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