ggKbase home page

rifcsphigho2_02_scaffold_5330

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5330_1
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(2..1879)
-----------------
DNA (1878bp)
protein (626aa)
periplasmic copper-binding protein Tax=RBG_16_Micrarchaeota_49_10_curated
cell surface protein id=5043703 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_5330_2
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1876..2289)
-----------------
DNA (414bp)
protein (138aa)
id=5047280 Tax=CG_Woesearch_02
id=5048114 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_5330_3
unknown

Not on your lists

2515..3171
-----------------
DNA (657bp)
protein (219aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5330_4

Not on your lists

comp(3279..4955)
-----------------
DNA (1677bp)
protein (559aa)
Uncharacterized protein (Fragment) id=5048022 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45616.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_5330_5
unknown

Not on your lists

5273..5428
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5330_6
unknown

Not on your lists

5430..5621
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5330_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

5618..8467
-----------------
DNA (2850bp)
protein (950aa)
id=5048012 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5048012 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_5330_8
unknown

Not on your lists

8464..9243
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5330_9

Not on your lists

9240..10421
-----------------
DNA (1182bp)
protein (394aa)
Putative uncharacterized protein id=5048003 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45597.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_5330_10
unknown

Not on your lists

comp(10393..10575)
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5330_11
unknown

Not on your lists

10760..11029
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5330_12
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

11214..11957
-----------------
DNA (744bp)
protein (248aa)
ATPase, AAA-type, core id=5799675 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ATPase, AAA-type, core Tax=AR15
rifcsphigho2_02_scaffold_5330_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

11957..12694
-----------------
DNA (738bp)
protein (246aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein id=5799674 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_5330_14
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12844..14586
-----------------
DNA (1743bp)
protein (581aa)
DNA mismatch repair protein MutL n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VD0_METBU rbh
DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Me
rifcsphigho2_02_scaffold_5330_15
unknown

Not on your lists

14763..15581
-----------------
DNA (819bp)
protein (273aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5330_16
unknown

Not on your lists

15719..15853
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5330_17
unknown

Not on your lists

comp(15837..16169)
-----------------
DNA (333bp)
protein (111aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5330_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16310..16888)
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y726_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41252.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
rifcsphigho2_02_scaffold_5330_19
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16940..17914
-----------------
DNA (975bp)
protein (325aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H0K6_9EURY
hypothetical protein Tax=CG_Anaero_01
hypothetical protein
Displaying 19 items

View Taxonomy