ggKbase home page

rifcsphigho2_02_scaffold_5650

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_5650_1
unknown

Not on your lists

comp(1..111)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_2
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

332..2062
-----------------
DNA (1731bp)
protein (577aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363A152
rifcsphigho2_02_scaffold_5650_3
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2094..2753
-----------------
DNA (660bp)
protein (220aa)
Putative ATP binding protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CW13_METMJ
ATP binding protein
rifcsphigho2_02_scaffold_5650_4
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

2750..3286
-----------------
DNA (537bp)
protein (179aa)
Glutamine amidotransferase class-I n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FHJ9_9EURY
glutamine amidotransferase class-I
rifcsphigho2_02_scaffold_5650_5
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

3308..3673
-----------------
DNA (366bp)
protein (122aa)
iron-sulfur cluster assembly accessory protein id=1246982 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Iron-sulfur cluster assembly accessory protein
rifcsphigho2_02_scaffold_5650_6
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

3715..3927
-----------------
DNA (213bp)
protein (71aa)
Uncharacterized protein (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TY35_9EURY
hypothetical protein
rifcsphigho2_02_scaffold_5650_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4272..5033)
-----------------
DNA (762bp)
protein (254aa)
rifcsphigho2_02_scaffold_5650_8
unknown

Not on your lists

comp(4981..5556)
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_9
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

5603..6133
-----------------
DNA (531bp)
protein (177aa)
Metallophosphoesterase n=1 Tax=uncultured bacterium RepID=K2E1F8_9BACT
calcineurin-like phosphoesterase
rifcsphigho2_02_scaffold_5650_10
R_SM2F11_43_13, SM2F11, Bacteria

Not on your lists

comp(6141..6857)
-----------------
DNA (717bp)
protein (239aa)
LmbE family protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7T5_SPHTD
LmbE family protein
rifcsphigho2_02_scaffold_5650_11

Not on your lists

comp(6838..7965)
-----------------
DNA (1128bp)
protein (376aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K15526 L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] id=5085157 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
cysteinyl-tRNA synthetase (EC:6.1.1.16)
rifcsphigho2_02_scaffold_5650_12
unknown

Not on your lists

comp(7991..8167)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_13
unknown

Not on your lists

comp(8274..8897)
-----------------
DNA (624bp)
protein (208aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_14
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9078..9674)
-----------------
DNA (597bp)
protein (199aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAU1_MYXSD
Crp/Fnr family transcriptional regulator
rifcsphigho2_02_scaffold_5650_15
unknown

Not on your lists

comp(9677..9820)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_16
unknown

Not on your lists

9957..10172
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_17
unknown

Not on your lists

10169..10963
-----------------
DNA (795bp)
protein (265aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_18
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11039..11617)
-----------------
DNA (579bp)
protein (193aa)
id=5048867 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_5650_19
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(11786..12754)
-----------------
DNA (969bp)
protein (323aa)
Beta-lactamase class A-like protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G729_GEOUR id=5088071 bin=OP11_3 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=OP11_3 organism_group=OP11 (Microgenomates) organism_desc=Complete genome
rifcsphigho2_02_scaffold_5650_20
Candidatus Parvarchaeum acidiphilum, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

12823..13485
-----------------
DNA (663bp)
protein (221aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EFM2_9EURY
hypothetical protein
rifcsphigho2_02_scaffold_5650_21
unknown

Not on your lists

13482..13838
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_22
unknown

Not on your lists

14501..15160
-----------------
DNA (660bp)
protein (220aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_trna_2
unknown

Not on your lists

comp(15642..15716)
-----------------
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_5650_trna_1
unknown

Not on your lists

comp(15755..15826)
-----------------
DNA (72bp)
transferRNA
rifcsphigho2_02_scaffold_5650_23
unknown

Not on your lists

15985..16548
-----------------
DNA (564bp)
protein (188aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5650_24
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

16548..16856
-----------------
DNA (309bp)
protein (103aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWU3_9EURY
rifcsphigho2_02_scaffold_5650_25
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(16735..17508)
-----------------
DNA (774bp)
protein (258aa)
RNA methyltransferase, TrmH family, group 1 id=5800379 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SpoU rRNA methylase
rifcsphigho2_02_scaffold_5650_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17505..18689)
-----------------
DNA (1185bp)
protein (395aa)
Predicted membrane-associated Zn-dependent protease id=5800378 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase M50
rifcsphigho2_02_scaffold_5650_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18691..18852)
-----------------
DNA (162bp)
protein (54aa)
hypothetical protein
id=5800377 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_5650_28

Not on your lists


comp(18855..19250)
-----------------
DNA (396bp)
protein (132aa)
ASCG--Translation--initiation--factor--5A
Translation initiation factor 5A id=5800376 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
Displaying items 1-30 of 31 in total

View Taxonomy