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rifcsphigho2_02_scaffold_5889

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5889_1
unknown

Not on your lists

comp(1..354)
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_2
unknown

Not on your lists

comp(351..899)
-----------------
DNA (549bp)
protein (183aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_3
unknown

Not on your lists

comp(896..1456)
-----------------
DNA (561bp)
protein (187aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_4
unknown

Not on your lists

comp(1453..2046)
-----------------
DNA (594bp)
protein (198aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_5
unknown

Not on your lists

comp(2043..3092)
-----------------
DNA (1050bp)
protein (350aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_6
unknown

Not on your lists

comp(3089..3736)
-----------------
DNA (648bp)
protein (216aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_7
unknown

Not on your lists

comp(3739..4494)
-----------------
DNA (756bp)
protein (252aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_8
unknown

Not on your lists

comp(4478..5116)
-----------------
DNA (639bp)
protein (213aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_9
unknown

Not on your lists

comp(5116..5631)
-----------------
DNA (516bp)
protein (172aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_10
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

5761..8907
-----------------
DNA (3147bp)
protein (1049aa)
Isoleucine--tRNA ligase Tax=AR15
Isoleucine--tRNA ligase id=5800603 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
isoleucyl-tRNA synthetase
rifcsphigho2_02_scaffold_5889_11

Not on your lists

8931..9905
-----------------
DNA (975bp)
protein (325aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
H/ACA RNA-protein complex component Cbf5p
rifcsphigho2_02_scaffold_5889_12
unknown

Not on your lists

comp(9906..10241)
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_13
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(10379..13405)
-----------------
DNA (3027bp)
protein (1009aa)
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] Tax=CG_Pacearch_04
ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5047490 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
lon3; Lon-like ATP-dependent protease (EC:3.4.21.-)
rifcsphigho2_02_scaffold_5889_14
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

13721..14005
-----------------
DNA (285bp)
protein (95aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TCE2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN27133.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source
rifcsphigho2_02_scaffold_5889_15
unknown

Not on your lists

comp(13992..14399)
-----------------
DNA (408bp)
protein (136aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_16
unknown

Not on your lists

comp(14396..14965)
-----------------
DNA (570bp)
protein (190aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_17
unknown

Not on your lists

comp(14967..15530)
-----------------
DNA (564bp)
protein (188aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_18
unknown

Not on your lists

comp(15527..16180)
-----------------
DNA (654bp)
protein (218aa)

This feature has no annotations

rifcsphigho2_02_scaffold_5889_19
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16321..17496)
-----------------
DNA (1176bp)
protein (392aa)
tyrosine/nicotianamine aminotransferase; K14260 alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
Tyrosine/nicotianamine aminotransferase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8C4_THEID
tyrosine/nicotianamine aminotransferase
rifcsphigho2_02_scaffold_5889_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17549..18217
-----------------
DNA (669bp)
protein (223aa)
SAM-dependent methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=GWA2_Rokubacteria_70_23_curated
Ribosomal RNA small subunit methyltransferase I id=4070961 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
SAM-dependent methyltransferase
rifcsphigho2_02_scaffold_5889_21
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18214..18642
-----------------
DNA (429bp)
protein (143aa)
rlmH; ribosomal RNA large subunit methyltransferase H (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rR
UPI0003D69F1A related cluster n=1 Tax=unknown RepID=UPI0003D69F1A
rifcsphigho2_02_scaffold_5889_22

Not on your lists

18801..19028
-----------------
DNA (228bp)
protein (76aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S06361 {ECO:0000313|EMBL:GAG13804.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
id=5050163 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_5889_23
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

19021..19332
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein
Putative uncharacterized protein Tax=RBG_16_Micrarchaeota_49_10_curated
Putative uncharacterized protein id=3133066 bin=GWA2_Ignavibacteria-rel_35_8 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
rifcsphigho2_02_scaffold_5889_24
unknown

Not on your lists

19413..19481
-----------------
DNA (69bp)
protein (23aa)

This feature has no annotations

Displaying 24 items

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