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rifcsphigho2_02_scaffold_9917

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_9917_1
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

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177..977
-----------------
DNA (801bp)
protein (267aa)
Putative phosphoesterase id=1803546 bin=GWD2_CPR2_39_7 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
hypothetical protein
rifcsphigho2_02_scaffold_9917_2
unknown

Not on your lists

comp(1020..1619)
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9917_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(1619..2116)
-----------------
DNA (498bp)
protein (166aa)
rifcsphigho2_02_scaffold_9917_trna_2
unknown

Not on your lists

comp(2207..2290)
-----------------
DNA (84bp)
transferRNA
rifcsphigho2_02_scaffold_9917_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(2567..3517)
-----------------
DNA (951bp)
protein (317aa)
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB id=5043581 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription initiation factor IIB
rifcsphigho2_02_scaffold_9917_5
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

3827..5095
-----------------
DNA (1269bp)
protein (423aa)
Serine--tRNA ligase n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HI60_METFS
seryl-tRNA synthetase
rifcsphigho2_02_scaffold_9917_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5092..5757
-----------------
DNA (666bp)
protein (222aa)
superfamily II helicase (EC:3.6.1.-); K03726 helicase [EC:3.6.4.-] id=5047477 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ski2-like helicase
rifcsphigho2_02_scaffold_9917_7
unknown

Not on your lists

comp(5738..6040)
-----------------
DNA (303bp)
protein (101aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9917_8
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6181..7014)
-----------------
DNA (834bp)
protein (278aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHK8_9EURY id=5103875 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_9917_9
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7014..7349)
-----------------
DNA (336bp)
protein (112aa)
Thioredoxin n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LQ7_SYMTH
thioredoxin
rifcsphigho2_02_scaffold_9917_10
RBG_16_OP11_Woesebacteria_39_8b_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

7564..8595
-----------------
DNA (1032bp)
protein (344aa)
dienelactone hydrolase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C507A
rifcsphigho2_02_scaffold_9917_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

8761..9597
-----------------
DNA (837bp)
protein (279aa)
myo-inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
inositol-phosphate phosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=5240566 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_9917_12
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

9775..10389
-----------------
DNA (615bp)
protein (205aa)
# 72291 # 72806 # -1 # ;gc_cont=0.554 id=18315868 bin=Nanosalinarum tax=Nanosalinarum
rifcsphigho2_02_scaffold_9917_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10394..11572)
-----------------
DNA (1179bp)
protein (393aa)
hypothetical protein id=5044597 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_9917_14
R_OD1_Wolfebacteria_41_13b, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

11707..12441
-----------------
DNA (735bp)
protein (245aa)
rifcsphigho2_02_scaffold_9917_trna_1
unknown

Not on your lists

12567..12640
-----------------
DNA (74bp)
transferRNA
Displaying 16 items

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