ggKbase home page

rifcsphigho2_02_scaffold_2169

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_2169_1
unknown

Not on your lists

comp(1..297)
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_2
unknown

Not on your lists

402..764
-----------------
DNA (363bp)
protein (121aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_3
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

761..1600
-----------------
DNA (840bp)
protein (280aa)
Uncharacterized protein n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZL82_THELI
hypothetical protein
rifcsphigho2_02_scaffold_2169_4
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2052..2819
-----------------
DNA (768bp)
protein (256aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI0003642C41
Acetyltransferase (GNAT) family protein
rifcsphigho2_02_scaffold_2169_5
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

2819..3853
-----------------
DNA (1035bp)
protein (345aa)
Peptidase M20 n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWC6_9EURY
peptidase M20
rifcsphigho2_02_scaffold_2169_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(3871..4842)
-----------------
DNA (972bp)
protein (324aa)
Hef, Helicase-associated endonuclease for fork-structured DNA (Hef) n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A607_THEGJ
DEAD/DEAH box helicase
rifcsphigho2_02_scaffold_2169_7
R_OD1_Uhrbacteria_57_19, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5470..6372)
-----------------
DNA (903bp)
protein (301aa)
Bile acid:sodium symporter family protein id=1830033 bin=GWE2_Bacteroidetes_42_39 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
rifcsphigho2_02_scaffold_2169_8
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6369..7370)
-----------------
DNA (1002bp)
protein (334aa)
NHL repeat containing protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GKB4_METPE
NHL repeat containing protein
rifcsphigho2_02_scaffold_2169_9

Not on your lists

comp(7394..10360)
-----------------
DNA (2967bp)
protein (989aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5241347 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein
rifcsphigho2_02_scaffold_2169_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10357..10785)
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein id=14431330 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
rifcsphigho2_02_scaffold_2169_11
unknown

Not on your lists

comp(10822..11304)
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_12
unknown

Not on your lists

11361..11828
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_13
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(11825..12736)
-----------------
DNA (912bp)
protein (304aa)
Bifunctional protein FolD n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JNV1_HALH3
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase
rifcsphigho2_02_scaffold_2169_14
unknown

Not on your lists

comp(13055..13738)
-----------------
DNA (684bp)
protein (228aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_15
unknown

Not on your lists

comp(13731..14396)
-----------------
DNA (666bp)
protein (222aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_16
R_OD1_48_18, Parcubacteria, Bacteria

Not on your lists

14490..16922
-----------------
DNA (2433bp)
protein (811aa)
serine protease inhibitor dipetalogastin precursor, putative
rifcsphigho2_02_scaffold_2169_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

16923..17156
-----------------
DNA (234bp)
protein (78aa)
rifcsphigho2_02_scaffold_2169_18
unknown

Not on your lists

17257..18201
-----------------
DNA (945bp)
protein (315aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(18171..19268)
-----------------
DNA (1098bp)
protein (366aa)
Predicted nonsense mediated mRNA decay protein id=5800424 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
NMD3 family protein
rifcsphigho2_02_scaffold_2169_20
unknown

Not on your lists

19468..19758
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_21

Not on your lists

comp(19706..20626)
-----------------
DNA (921bp)
protein (307aa)
hypothetical protein id=5098304 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsphigho2_02_scaffold_2169_22
unknown

Not on your lists

comp(20766..21617)
-----------------
DNA (852bp)
protein (284aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_23
unknown

Not on your lists

21780..22259
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2169_24
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(22256..23272)
-----------------
DNA (1017bp)
protein (339aa)
L-proline dehydrogenase; K00318 proline dehydrogenase [EC:1.5.99.8] id=14629970 bin=bin8_Chloro tax=bin8_Chloro organism_group=Chloroflexi rbh
L-proline dehydrogenase (EC:1.5.99.8)
rifcsphigho2_02_scaffold_2169_25
Pontibacillus marinus, Pontibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23376..24263
-----------------
DNA (888bp)
protein (296aa)
Ribonuclease BN n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09C48_STIAD
hypothetical protein
rifcsphigho2_02_scaffold_2169_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(24260..26065)
-----------------
DNA (1806bp)
protein (602aa)
ABC-2 type transporter; K09686 antibiotic transport system permease protein id=5046883 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
antibiotic transport system permease protein
rifcsphigho2_02_scaffold_2169_27

Not on your lists

comp(26065..26799)
-----------------
DNA (735bp)
protein (245aa)
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein id=5046884 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
putative ABC transporter ATP-binding protein
rifcsphigho2_02_scaffold_2169_28

Not on your lists

26872..27576
-----------------
DNA (705bp)
protein (235aa)
Methyltransferase type 11 id=5799920 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative methyltransferase
rifcsphigho2_02_scaffold_2169_29
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

27621..27938
-----------------
DNA (318bp)
protein (106aa)
id=5046822 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_2169_30
unknown

Not on your lists

comp(27935..28411)
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

View Taxonomy