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rifcsphigho2_02_scaffold_27159

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_27159_1

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139..390
-----------------
DNA (252bp)
protein (84aa)
seg id=5800104 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61435.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_27159_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

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393..1277
-----------------
DNA (885bp)
protein (295aa)
translation initiation factor, aIF-2BII family (EC:5.3.1.23)
ribose-1/5-bisphosphate isomerase id=73634 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
ribose-1/5-bisphosphate isomerase; K03680 translation initiation factor eIF-2B subunit delta Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
rifcsphigho2_02_scaffold_27159_3

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comp(1237..1776)
-----------------
DNA (540bp)
protein (180aa)
Marine sediment metagenome DNA, contig: S01H1_L06225 {ECO:0000313|EMBL:GAF73174.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha id=5041815 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription factor E
rifcsphigho2_02_scaffold_27159_4
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1853..2434)
-----------------
DNA (582bp)
protein (194aa)
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type Tax=CG_Woesearch_01
Holliday junction-type resolvase; K03552 holliday junction resolvase, archaea type id=5041814 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Resolvase, Holliday junction-type
rifcsphigho2_02_scaffold_27159_5
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(2484..3371)
-----------------
DNA (888bp)
protein (296aa)
rnz; ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] Tax=CG_Pacearch_04
Ribonuclease Z id=5800107 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNAse Z
rifcsphigho2_02_scaffold_27159_6
AR4, Woesearchaeaota, DPANN, Archaea

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3547..4440
-----------------
DNA (894bp)
protein (298aa)
PROKAR_LIPOPROTEIN id=5041788 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
PROKAR_LIPOPROTEIN Tax=AR4
rifcsphigho2_02_scaffold_27159_7
CG_Woesearch_02, Woesearchaeota, Archaea

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4454..5404
-----------------
DNA (951bp)
protein (317aa)
id=5800187 Tax=CG_Woesearch_02
id=5800187 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_27159_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5490..6449)
-----------------
DNA (960bp)
protein (320aa)
rfc; replication factor C small subunit; K04801 replication factor C small subunit Tax=CG_Woesearch_02
rfc; replication factor C small subunit; K04801 replication factor C small subunit id=5046355 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor C small subunit
rifcsphigho2_02_scaffold_27159_9
unknown

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comp(6620..6811)
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_27159_10
unknown

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comp(6805..6924)
-----------------
DNA (120bp)
protein (40aa)

This feature has no annotations

rifcsphigho2_02_scaffold_27159_11
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

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6983..7267
-----------------
DNA (285bp)
protein (95aa)
folate-binding protein YgfZ; K06980 Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
Displaying 11 items

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