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rifcsphigho2_02_scaffold_18283

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_18283_1
AR9, Woesearchaeaota, DPANN, Archaea

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comp(2..331)
-----------------
DNA (330bp)
protein (110aa)
Tax=AR9
rifcsphigho2_02_scaffold_18283_2
AR9, Woesearchaeaota, DPANN, Archaea

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comp(328..747)
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein n=1 Tax=Lysinibacillus fusiformis ZB2 RepID=K9A1D4_9BACI id=5103500 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=AR9
hypothetical protein
rifcsphigho2_02_scaffold_18283_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(744..1490)
-----------------
DNA (747bp)
protein (249aa)
hypothetical protein id=5041917 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
Heavy metal transport/detoxification protein
rifcsphigho2_02_scaffold_18283_4

Not on your lists

comp(1768..2022)
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO53558.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
id=5049701 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_18283_5
AR9, Woesearchaeaota, DPANN, Archaea

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comp(2024..2182)
-----------------
DNA (159bp)
protein (53aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FABAB
Tax=AR9
rifcsphigho2_02_scaffold_18283_6
AR9, Woesearchaeaota, DPANN, Archaea

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comp(2202..2639)
-----------------
DNA (438bp)
protein (146aa)
seg id=5041713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_02_scaffold_18283_7

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comp(2629..3048)
-----------------
DNA (420bp)
protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN93525.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein id=5800409 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_18283_8

Not on your lists

3116..3550
-----------------
DNA (435bp)
protein (145aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator id=5240645 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PadR-like protein family transcriptional regulator {ECO:0000313|EMBL:AJF59638.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_18283_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3544..4035)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380F1AA
hypothetical protein Tax=AR4
hypothetical protein
rifcsphigho2_02_scaffold_18283_10
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(4095..4541)
-----------------
DNA (447bp)
protein (149aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003771F93
hypothetical protein Tax=CG_Pacearch_04
rifcsphigho2_02_scaffold_18283_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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4577..5524
-----------------
DNA (948bp)
protein (316aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FXC2_9SPHI
restriction endonuclease Tax=RBG_13_Pacearchaeota_36_9_curated
transcriptional regulator
rifcsphigho2_02_scaffold_18283_12
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(5521..7044)
-----------------
DNA (1524bp)
protein (508aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCX7_DESTA
napH; polyferredoxin protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
rifcsphigho2_02_scaffold_18283_13
CG_CPR14_01, CG_CPR14, Bacteria

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comp(7048..7521)
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E987E
hypothetical protein Tax=CG_CPR14_01
hypothetical protein
rifcsphigho2_02_scaffold_18283_14

Not on your lists

comp(7595..8065)
-----------------
DNA (471bp)
protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49663.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
"Winged helix" DNA-binding domain id=5800418 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_18283_15
unknown

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8120..8581
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsphigho2_02_scaffold_18283_16
GWB1_OP11_41_5, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

8756..9463
-----------------
DNA (708bp)
protein (236aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000368C3CA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKS13599.1}; TaxID=1618429 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_5.;"
rifcsphigho2_02_scaffold_18283_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9650..10207)
-----------------
DNA (558bp)
protein (186aa)
Multicopper oxidase type 1 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL73_9GAMM
Multicopper oxidase type 1 {ECO:0000313|EMBL:EIL87964.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
multicopper oxidase, type 3
Displaying 17 items

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