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rifcsphigho2_02_scaffold_26184

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_26184_1
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..528)
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI0003615111
Metal-dependent Hydrolase of the beta-lactamase superfamily III {ECO:0000313|EMBL:EDM75479.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannoc
beta-lactamase domain-containing protein
rifcsphigho2_02_scaffold_26184_2
R_OD1_57_28, Parcubacteria, Bacteria

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comp(525..767)
-----------------
DNA (243bp)
protein (81aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZZX1_9BACT
transmembrane_regions Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
rifcsphigho2_02_scaffold_26184_3
CG_Woesearch_02, Woesearchaeota, Archaea

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912..2144
-----------------
DNA (1233bp)
protein (411aa)
hypothetical protein Tax=CG_Woesearch_02
Uncharacterized protein id=5799713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_26184_4

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comp(2141..3253)
-----------------
DNA (1113bp)
protein (371aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase id=5240775 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AJF59767.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_26184_5

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3368..3760
-----------------
DNA (393bp)
protein (131aa)
id=5799756 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61087.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_26184_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(3931..4146)
-----------------
DNA (216bp)
protein (72aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000381946E
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_26184_7
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4254..4970
-----------------
DNA (717bp)
protein (239aa)
Alpha/beta hydrolase fold protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4B2G4_KROS4
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:KDB06807.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;
alpha/beta hydrolase fold protein
rifcsphigho2_02_scaffold_26184_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4957..6618)
-----------------
DNA (1662bp)
protein (554aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] Tax=CG_Woesearch_02
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17); K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=5045697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glutamate-tRNA ligase
rifcsphigho2_02_scaffold_26184_9
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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6681..6944
-----------------
DNA (264bp)
protein (88aa)
Transcription factor CBF/NF-Y/histone domain-containing protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMN7_ARCVS
transcription factor CBF/NF-Y/histone domain-containing protein
Transcription factor CBF/NF-Y/histone domain-containing protein {ECO:0000313|EMBL:AEA47234.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglo
rifcsphigho2_02_scaffold_26184_trna_1
unknown

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6935..7008
-----------------
DNA (74bp)
transferRNA
Displaying 10 items

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