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rifcsphigho2_02_scaffold_1913

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1913_1
RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..817)
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein Tax=RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated
rifcsphigho2_02_scaffold_1913_2
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

946..5700
-----------------
DNA (4755bp)
protein (1585aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=uncultured bacterium RepID=K2BWY2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR41702.1}; TaxID=1618431 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC2_40_12.;"
hypothetical protein
rifcsphigho2_02_scaffold_1913_3
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(5692..6588)
-----------------
DNA (897bp)
protein (299aa)
PROKAR_LIPOPROTEIN Tax=CG_Woesearch_02
transmembrane_regions id=5041790 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_1913_4
unknown

Not on your lists

comp(6585..8327)
-----------------
DNA (1743bp)
protein (581aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1913_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(8393..9580)
-----------------
DNA (1188bp)
protein (396aa)
id=5046362 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5046362 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_1913_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


9918..10964
-----------------
DNA (1047bp)
protein (349aa)
mRNA surveillance protein Pelota Tax=RBG_13_Woesearchaeota_36_6_curated
cell division protein; K06965 protein pelota id=5046363 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mRNA surveillance protein Pelota
rifcsphigho2_02_scaffold_1913_7

Not on your lists

11122..11928
-----------------
DNA (807bp)
protein (269aa)
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46833.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_1913_8

Not on your lists


12074..13591
-----------------
DNA (1518bp)
protein (506aa)
Phenylalanyl-tRNA synthetase alpha chain {ECO:0000313|EMBL:KHO46829.1}; EC=6.1.1.20 {ECO:0000313|EMBL:KHO46829.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CA4E5
Phenylalanine-tRNA ligase alpha subunit
rifcsphigho2_02_scaffold_1913_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


13593..15254
-----------------
DNA (1662bp)
protein (554aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=AR11
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A334
Phenylalanine-tRNA ligase beta subunit
rifcsphigho2_02_scaffold_1913_10
unknown

Not on your lists

15251..15403
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1913_11
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(15509..16966)
-----------------
DNA (1458bp)
protein (486aa)
hypothetical protein Tax=CG_Woesearch_01
Putative uncharacterized protein id=4825636 bin=GWC2_Nitrospirae_57_13 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
major facilitator transporter
rifcsphigho2_02_scaffold_1913_12
unknown

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comp(17019..17525)
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1913_13

Not on your lists

comp(17580..17921)
-----------------
DNA (342bp)
protein (114aa)
50S ribosomal protein L14e id=5800175 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L14e {ECO:0000313|EMBL:AJF61506.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
50S ribosomal protein L14e
rifcsphigho2_02_scaffold_1913_14
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17918..18187)
-----------------
DNA (270bp)
protein (90aa)
50S ribosomal protein L34e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZE5_METFV
50S ribosomal protein L34e
50S ribosomal protein L34e {ECO:0000256|HAMAP-Rule:MF_00349}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothe
rifcsphigho2_02_scaffold_1913_15

Not on your lists

comp(18332..18787)
-----------------
DNA (456bp)
protein (152aa)
exosome subunit; K07581 hypothetical protein id=5048514 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45548.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_1913_16
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

18840..19745
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein conserved in archaea id=5799929 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein conserved in archaea Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_1913_17
unknown

Not on your lists

19895..20683
-----------------
DNA (789bp)
protein (263aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1913_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(20680..21426)
-----------------
DNA (747bp)
protein (249aa)
beta-lactamase superfamily hydrolase Tax=CG_Woesearch_02
Metal-dependent hydrolase, beta-lactamase superfamily III id=5799925 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
metal-dependent hydrolase, beta-lactamase superfamily III
rifcsphigho2_02_scaffold_1913_19
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21423..22322)
-----------------
DNA (900bp)
protein (300aa)
Ornithine carbamoyltransferase, catabolic Tax=GWA2_OD1_40_9
Ornithine carbamoyltransferase, catabolic id=3003477 bin=GWF2_OP3_38_59 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
ornithine carbamoyltransferase
rifcsphigho2_02_scaffold_1913_20

Not on your lists


comp(22355..22612)
-----------------
DNA (258bp)
protein (86aa)
Ribosomal protein L35AE/L33A id=5800467 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal protein L35AE/L33A {ECO:0000313|EMBL:AJF61798.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
50S ribosomal protein L35Ae
rifcsphigho2_02_scaffold_1913_21

Not on your lists

22852..23532
-----------------
DNA (681bp)
protein (227aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6AAC
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
peptidyl-prolyl cis-trans isomerase FKBP-type
rifcsphigho2_02_scaffold_1913_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

23587..24705
-----------------
DNA (1119bp)
protein (373aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_02
cell division protein FtsZ; K03531 cell division protein FtsZ id=5043664 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Cell division protein FtsZ
rifcsphigho2_02_scaffold_1913_23

Not on your lists

24707..24892
-----------------
DNA (186bp)
protein (62aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1579365 species="Archaea.;" source="a
rifcsphigho2_02_scaffold_1913_24

Not on your lists


24901..25530
-----------------
DNA (630bp)
protein (210aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_02_scaffold_1913_25
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(25532..26167)
-----------------
DNA (636bp)
protein (212aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR78594.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
hypothetical protein id=5048447 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_1913_26
Pseudothermotoga thermarum, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

26315..27583
-----------------
DNA (1269bp)
protein (423aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YU10_9THEM
rifcsphigho2_02_scaffold_1913_27
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

27549..28730
-----------------
DNA (1182bp)
protein (394aa)
Argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=CG_Elusi_01
Argininosuccinate lyase id=4455866 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
argininosuccinate lyase
rifcsphigho2_02_scaffold_1913_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

28751..29863
-----------------
DNA (1113bp)
protein (371aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
tryptophanyl-tRNA synthetase Tax=CG_Woesearch_02
Tryptophan--tRNA ligase id=3672836 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_1913_29
Aspergillus kawachii, Aspergillus, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

29964..30632
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein n=2 Tax=Aspergillus niger RepID=G3XS90_ASPNA
Similar to An01g14440 {ECO:0000313|EMBL:GAA86837.1}; TaxID=1033177 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergi
hypothetical protein
Displaying 29 items

View Taxonomy