ggKbase home page

rifcsphigho2_02_scaffold_1413_9

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_62_20

near complete RP 35 / 55 MC: 6 BSCG 12 / 51 ASCG 36 / 38 MC: 1
Location: 7545..8267

Top 3 Functional Annotations

Value Algorithm Source
ASCG--Ribosome--maturation--protein--SDO1--homolog similarity ASCG
  • Identity: null
  • Coverage: null
  • Bit_score: null
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=5046928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 236.0
  • Bit_score: 260
  • Evalue 1.60e-66
RNA-associated protein similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 223.0
  • Bit_score: 232
  • Evalue 1.00e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_02 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 723
ATGCACGGAAGAGAGACCTTCGACAAGGACAGGATTCACATCAACGTCGCGCGCCTCAGGAAAGGAGGCCAGACCTTCGAGGTCGTCGTTGACGCGGACCAGGCAGTCGCCTTCCGGGAGGGGAGGCTGAAGGATTTCCGCGAGGTGGTGAAGAGCCAGGAGGTCTTCACCGACGCCAAGAAGGGGGAGCGCGCCCAGGAGTCGCACTTCGCCCAGGTGTTCAACACCACCGACAAGGACGAGGTCCTCAGGATGATCCTGTCCGAGGGCGAGATTCAGCTCACCGCCGAATACCGGCAGAAGCTCCGTGACGCGAAGAAGCGGCAGATCATCACCATCATCCACCGCAACGGCGTCGACCCGAAGACGCATCTCCCCCATCCGGTGACGCGGCTGGAGAACGCCTTCGAGGAGGCCAAGGTCCATCTCGACGAGTTCCGGCGCGCGGAGGACCAGGTCCAGGATGTCCTGAAGAGCCTGAGGCTGGTGCTGCCCATCAAGTTCGAGCTTGTGGAGGTCGCGCTGCGCATCCCGGCCCAGCACGCGACGAGGGCCTATGGCACCGTCAAGAGCTACTGCAAGATACTGCGCGACGAGTGGCTGTCCGACGGCACGTGGAGCGCGGTGGTGGAGCTTCCGGCTGGCCTGAGGGACGAGCTCTTCGACGAGCTCAACAGGCAGACGCACGGCAATGTGGAGTCCAGAGTAGTACAGACAAGGTGA
PROTEIN sequence
Length: 241
MHGRETFDKDRIHINVARLRKGGQTFEVVVDADQAVAFREGRLKDFREVVKSQEVFTDAKKGERAQESHFAQVFNTTDKDEVLRMILSEGEIQLTAEYRQKLRDAKKRQIITIIHRNGVDPKTHLPHPVTRLENAFEEAKVHLDEFRRAEDQVQDVLKSLRLVLPIKFELVEVALRIPAQHATRAYGTVKSYCKILRDEWLSDGTWSAVVELPAGLRDELFDELNRQTHGNVESRVVQTR*