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rifcsphigho2_02_scaffold_3073

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_3073_1

Not on your lists

43..741
-----------------
DNA (699bp)
protein (233aa)
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5044446 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
exosome complex exonuclease Rrp41
rifcsphigho2_02_scaffold_3073_2
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

729..1445
-----------------
DNA (717bp)
protein (239aa)
3' exoribonuclease; K12589 exosome complex component RRP42 id=18248380 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Ribosomal RNA-processing protein RRP42
rifcsphigho2_02_scaffold_3073_3
unknown

Not on your lists

1483..1635
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3073_4
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

comp(1727..2857)
-----------------
DNA (1131bp)
protein (377aa)
STE24 endopeptidase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AL94_IGNAJ
STE24 endopeptidase
rifcsphigho2_02_scaffold_3073_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(2866..3543)
-----------------
DNA (678bp)
protein (226aa)
Oxidoreductase FAD/NAD(P)-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT05_KORVE
oxidoreductase FAD/NAD(P)-binding protein
rifcsphigho2_02_scaffold_3073_6

Not on your lists

3676..4020
-----------------
DNA (345bp)
protein (115aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha id=4918915 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_3073_7
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

4026..4340
-----------------
DNA (315bp)
protein (105aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha id=4918915 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_3073_8

Not on your lists

comp(4442..5644)
-----------------
DNA (1203bp)
protein (401aa)
Uncharacterized protein n=3 Tax=Methanococcus maripaludis RepID=A4FZ02_METM5 id=5103793 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_3073_9
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(5641..6501)
-----------------
DNA (861bp)
protein (287aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MN08_9EURY
hypothetical protein
rifcsphigho2_02_scaffold_3073_10
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(6498..7157)
-----------------
DNA (660bp)
protein (220aa)
ABC transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQW5_9BACT
ABC transporter, ATP-binding protein
rifcsphigho2_02_scaffold_3073_11
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

7200..7454
-----------------
DNA (255bp)
protein (85aa)
alias=gwa2_scaffold_521_196 id=18248390 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsphigho2_02_scaffold_3073_12
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(7712..8119)
-----------------
DNA (408bp)
protein (136aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U5H7_9EURY
hypothetical protein
rifcsphigho2_02_scaffold_3073_13
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

8167..8517
-----------------
DNA (351bp)
protein (117aa)
transcription termination factor Tfs; K03057 transcription elongation factor id=5044464 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Transcription elongation factor S (TFS_arch)
rifcsphigho2_02_scaffold_3073_14

Not on your lists

8802..9476
-----------------
DNA (675bp)
protein (225aa)
hypothetical protein id=18248438 bin=AR5_curated_draft species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsphigho2_02_scaffold_3073_15
unknown

Not on your lists

comp(9437..10042)
-----------------
DNA (606bp)
protein (202aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3073_16
unknown

Not on your lists

comp(10244..10654)
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3073_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

10783..11721
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein id=18248394 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
putative transcriptional regulator
rifcsphigho2_02_scaffold_3073_18
unknown

Not on your lists

11748..12224
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3073_19
unknown

Not on your lists

comp(12228..12764)
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3073_20
unknown

Not on your lists

12816..13232
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3073_21
unknown

Not on your lists

13207..13464
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3073_22
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13549..14406
-----------------
DNA (858bp)
protein (286aa)
Sugar kinase, ribokinase family n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BFK0_9EURY
Sugar kinase, ribokinase family
rifcsphigho2_02_scaffold_3073_23

Not on your lists

comp(14539..15069)
-----------------
DNA (531bp)
protein (177aa)
id=4918931 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_3073_24
R_WOR_2_46_37, WOR-2, Bacteria

Not on your lists

comp(15070..15825)
-----------------
DNA (756bp)
protein (252aa)
inositol-phosphate phosphatase (EC:3.1.3.25)
inositol monophosphatase n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003712463
rifcsphigho2_02_scaffold_3073_25
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16013..16336
-----------------
DNA (324bp)
protein (108aa)
ATP synthase H subunit n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EWH9_9EURY
ATP synthase H subunit
rifcsphigho2_02_scaffold_3073_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16353..18158
-----------------
DNA (1806bp)
protein (602aa)
V-type ATP synthase subunit I (EC:3.6.3.14); K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] id=5044029 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
V-type ATP synthase subunit I
rifcsphigho2_02_scaffold_3073_27
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18285..18497
-----------------
DNA (213bp)
protein (71aa)
H+transporting two-sector ATPase C subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MSI1_9EURY
H+transporting two-sector ATPase C subunit
rifcsphigho2_02_scaffold_3073_28
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

18542..19087
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI00036E1032
V-type proton ATPase subunit E
rifcsphigho2_02_scaffold_3073_29

Not on your lists

19127..20071
-----------------
DNA (945bp)
protein (315aa)
ATP synthase A1 subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14] id=5042343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase subunit C (EC:3.6.3.14)
rifcsphigho2_02_scaffold_3073_30
unknown

Not on your lists

20073..20372
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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