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rifcsphigho2_02_scaffold_1831

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsphigho2_02_scaffold_1831_1
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

557..1930
-----------------
DNA (1374bp)
protein (458aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000372F550
putative transcriptional regulator
rifcsphigho2_02_scaffold_1831_2
unknown

Not on your lists

2772..3509
-----------------
DNA (738bp)
protein (246aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

3820..4656
-----------------
DNA (837bp)
protein (279aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371A96B
hypothetical protein
rifcsphigho2_02_scaffold_1831_4

Not on your lists

4733..5779
-----------------
DNA (1047bp)
protein (349aa)
Radical SAM domain-containing protein id=5799836 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_1831_5
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

5835..6563
-----------------
DNA (729bp)
protein (243aa)
NH(3)-dependent NAD+ synthetase NadE; K01916 NAD+ synthase [EC:6.3.1.5] id=5090879 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
NH(3)-dependent NAD(+) synthetase
rifcsphigho2_02_scaffold_1831_6
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(6887..7348)
-----------------
DNA (462bp)
protein (154aa)
NUDIX hydrolase n=1 Tax=Geitlerinema sp. PCC 7105 RepID=UPI000347243D
ADP-ribose pyrophosphatase
rifcsphigho2_02_scaffold_1831_7

Not on your lists

7455..9059
-----------------
DNA (1605bp)
protein (535aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B8391
hypothetical protein
rifcsphigho2_02_scaffold_1831_8
unknown

Not on your lists

comp(9110..10228)
-----------------
DNA (1119bp)
protein (373aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_9

Not on your lists

comp(10305..11387)
-----------------
DNA (1083bp)
protein (361aa)
Type 2 DNA topoisomerase 6 subunit A id=5800437 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Type 2 DNA topoisomerase 6 subunit A
rifcsphigho2_02_scaffold_1831_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11461..13266)
-----------------
DNA (1806bp)
protein (602aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
rifcsphigho2_02_scaffold_1831_11
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13358..13909)
-----------------
DNA (552bp)
protein (184aa)
rifcsphigho2_02_scaffold_1831_12
unknown

Not on your lists

14072..14905
-----------------
DNA (834bp)
protein (278aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_trna_1
unknown

Not on your lists

comp(14930..15023)
-----------------
DNA (94bp)
transferRNA
rifcsphigho2_02_scaffold_1831_13

Not on your lists

comp(15455..16045)
-----------------
DNA (591bp)
protein (197aa)
seg id=5042273 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_1831_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

16222..17421
-----------------
DNA (1200bp)
protein (400aa)
Putative GTPase, probable translation factor n=1 Tax=nanoarchaeote Nst1 RepID=R1E424_9ARCH id=5103591 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_1831_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(17691..18083)
-----------------
DNA (393bp)
protein (131aa)
Zn-ribbon containing protein id=5800623 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Zn-ribbon containing protein
rifcsphigho2_02_scaffold_1831_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18201..18581)
-----------------
DNA (381bp)
protein (127aa)
seg id=5800622 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_02_scaffold_1831_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(18652..19284)
-----------------
DNA (633bp)
protein (211aa)
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small GTP-binding protein
rifcsphigho2_02_scaffold_1831_18

Not on your lists

19450..19992
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein
id=5799864 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1831_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

20191..20892
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein
seg id=5799865 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1831_20
RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

20959..21579
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00036C8A3B
lysine exporter protein LysE/YggA
rifcsphigho2_02_scaffold_1831_21
unknown

Not on your lists

comp(21612..21857)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_22
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

21983..22729
-----------------
DNA (747bp)
protein (249aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S313_DESTD
rifcsphigho2_02_scaffold_1831_23

Not on your lists

comp(22778..23500)
-----------------
DNA (723bp)
protein (241aa)
transcriptional regulator TrmB
transcriptional regulator TrmB id=5241641 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1831_24
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Berkelbacteria, Bacteria

Not on your lists

23777..24454
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein n=1 Tax=Ferroplasma acidarmanus fer1 RepID=S0AP89_FERAC
hypothetical protein
rifcsphigho2_02_scaffold_1831_25
unknown

Not on your lists

24496..25194
-----------------
DNA (699bp)
protein (233aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_26
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

25265..26302
-----------------
DNA (1038bp)
protein (346aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=5043939 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
phosphoenolpyruvate synthase (EC:2.7.9.2)
rifcsphigho2_02_scaffold_1831_27
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(26566..27189)
-----------------
DNA (624bp)
protein (208aa)
rifcsphigho2_02_scaffold_1831_28
unknown

Not on your lists

comp(27469..28278)
-----------------
DNA (810bp)
protein (270aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1831_29
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(28299..28535)
-----------------
DNA (237bp)
protein (79aa)
id=5044625 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Displaying items 1-30 of 42 in total

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