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rifcsphigho2_02_scaffold_1851

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1851_1
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(267..1811)
-----------------
DNA (1545bp)
protein (515aa)
prolyl-tRNA synthetase (EC:6.1.1.16); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Woesearch_01
prolyl-tRNA synthetase (EC:6.1.1.16)
Proline--tRNA ligase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=SYP_THEPD
rifcsphigho2_02_scaffold_1851_2
R_OP11_Daviesbacteria_44_29, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(1885..2439)
-----------------
DNA (555bp)
protein (185aa)
ydeN; putative sulfatase Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_44_29_curated
YdeN-like protein; K07002 id=5096051 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsphigho2_02_scaffold_1851_3
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(2699..3136)
-----------------
DNA (438bp)
protein (146aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Caloramator australicus RC3 RepID=G0V3Q9_9CLOT
hypothetical protein
rifcsphigho2_02_scaffold_1851_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3431..3712)
-----------------
DNA (282bp)
protein (94aa)
ssh10b_1; DNA/RNA-binding protein albA; K03622 archaea-specific DNA-binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
DNA/RNA-binding protein Alba; K03622 archaea-specific DNA-binding protein id=5043654 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA/RNA-binding protein Alba
rifcsphigho2_02_scaffold_1851_5

Not on your lists

comp(3826..4020)
-----------------
DNA (195bp)
protein (65aa)
30S ribosomal protein S17e n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=RS17E_THEON
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
rps17E; 30S ribosomal protein S17e
rifcsphigho2_02_scaffold_1851_6
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

4302..4943
-----------------
DNA (642bp)
protein (214aa)
Protein GrpE id=5799563 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Protein GrpE Tax=AR15
protein grpE
rifcsphigho2_02_scaffold_1851_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5022..5558
-----------------
DNA (537bp)
protein (179aa)
Uncharacterised protein family UPF0153 Tax=CG_Woesearch_02
Uncharacterised protein family UPF0153 id=5799564 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1851_8
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

5652..6104
-----------------
DNA (453bp)
protein (151aa)
seg id=5799565 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
seg Tax=AR15
rifcsphigho2_02_scaffold_1851_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6152..6493
-----------------
DNA (342bp)
protein (114aa)
Bacteriophage 92, 0rf53 Tax=CG_Woesearch_02
Bacteriophage 92, 0rf53 id=5799549 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_1851_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

6486..8567
-----------------
DNA (2082bp)
protein (694aa)
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Woesearch_02
Chaperone protein DnaK id=5799568 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
dnaK; molecular chaperone DnaK
rifcsphigho2_02_scaffold_1851_11
unknown

Not on your lists

comp(8551..8775)
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1851_12

Not on your lists

8921..9559
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein id=5799814 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61145.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
phosphatase
rifcsphigho2_02_scaffold_1851_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9564..10685
-----------------
DNA (1122bp)
protein (374aa)
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=CG_Woesearch_02
Chaperone protein DnaJ id=5800476 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chaperone protein DnaJ
rifcsphigho2_02_scaffold_1851_14
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(10943..12145)
-----------------
DNA (1203bp)
protein (401aa)
Phosphoesterase RecJ domain protein n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S3U9_METSF
phosphoesterase RecJ domain-containing protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:ADC69513.1}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Met
rifcsphigho2_02_scaffold_1851_15
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists


comp(12380..12646)
-----------------
DNA (267bp)
protein (89aa)
universal diphthamide biosynthesis domain-containing protein; K07561 diphthamide synthase subunit DPH2 Tax=GWA2_WOR_2_47_8_curated
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 id=5045815 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
diphthamide biosynthesis protein
rifcsphigho2_02_scaffold_1851_16
unknown

Not on your lists

comp(12840..13397)
-----------------
DNA (558bp)
protein (186aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1851_trna_2
unknown

Not on your lists

comp(13474..13548)
-----------------
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_1851_17
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

13860..14375
-----------------
DNA (516bp)
protein (172aa)
transcription initiation factor E subunit alpha; K03136 transcription initiation factor TFIIE subunit alpha Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
Transcription factor E id=5800744 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transcription factor E
rifcsphigho2_02_scaffold_1851_18
CG_Kuenen_01, Kuenenbacteria, Parcubacteria, Bacteria

Not on your lists

14474..14884
-----------------
DNA (411bp)
protein (137aa)
Histidine triad (HIT) protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THN6_CALNY id=5103048 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
histidine triad (hit) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=CG_Kuenen_01
Histidine triad (HIT) protein
rifcsphigho2_02_scaffold_1851_19
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14927..15616
-----------------
DNA (690bp)
protein (230aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
Protein-L-isoaspartate O-methyltransferase 1 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=PIMT1_METAC
pcm-1; protein-L-isoaspartate O-methyltransferase
rifcsphigho2_02_scaffold_1851_20
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15904..17253)
-----------------
DNA (1350bp)
protein (450aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003669D41
protoporphyrinogen oxidase Tax=AR9
hypothetical protein
rifcsphigho2_02_scaffold_1851_21
unknown

Not on your lists

17560..17910
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1851_22
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

18087..18368
-----------------
DNA (282bp)
protein (94aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=AR13
hypothetical protein n=1 Tax=Methanothermococcus thermolithotrophicus RepID=UPI000364A567
methylated-DNA/protein-cysteine methyltransferase
rifcsphigho2_02_scaffold_1851_23
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(18415..19341)
-----------------
DNA (927bp)
protein (309aa)
tfb; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB Tax=RBG_13_Woesearchaeota_36_6_curated
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB id=5043581 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription initiation factor IIB
rifcsphigho2_02_scaffold_1851_24
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

19574..19747
-----------------
DNA (174bp)
protein (58aa)
UPF0434 protein Theam_1326 n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T3N2_THEA1
hypothetical protein
UPF0434 protein Theam_1326 {ECO:0000256|HAMAP-Rule:MF_01187}; Flags: Precursor;; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" source="Thermov
rifcsphigho2_02_scaffold_1851_trna_1
unknown

Not on your lists

20153..20251
-----------------
DNA (99bp)
transferRNA
rifcsphigho2_02_scaffold_1851_25
unknown

Not on your lists

20431..20820
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1851_26
unknown

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comp(20855..21337)
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1851_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21363..22856)
-----------------
DNA (1494bp)
protein (498aa)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=CG_Woesearch_02
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5043588 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
deoA-1; thymidine phosphorylase (EC:2.4.2.4)
rifcsphigho2_02_scaffold_1851_28
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22932..24017)
-----------------
DNA (1086bp)
protein (362aa)
hypothetical protein Tax=AR9
hypothetical protein id=5043589 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Displaying items 1-30 of 51 in total

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