ggKbase home page

rifcsphigho2_02_scaffold_3401_9

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_33_21

near complete RP 32 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 37 / 38 MC: 1
Location: 4536..4733

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, N/8 Kd subunits; K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Pacearch_04 similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 64.0
  • Bit_score: 115
  • Evalue 3.20e-23
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 64.0
  • Bit_score: 107
  • Evalue 4.90e-21
DNA-directed RNA polymerase subunit N similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 64.0
  • Bit_score: 107
  • Evalue 1.40e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Pacearch_04 → Pacearchaeota → Archaea

Sequences

DNA sequence
Length: 198
ATGATGATTCCAATAAGATGTTTTTCATGCGGAAAGCCAGTAGCTCATTTGTGGGAAGATTACAAGAAACGCGTTGAAAACGGCGAAGACAGAAAAAAGATTCTTGATGAGATTGGATTAGATAGATACTGCTGCAGAGCTTTATTTTTGGGTCATGTCGATTTAATAGAAACTATTGGAAAGTTCAAGAAGTTTTAG
PROTEIN sequence
Length: 66
MMIPIRCFSCGKPVAHLWEDYKKRVENGEDRKKILDEIGLDRYCCRALFLGHVDLIETIGKFKKF*