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rifcsphigho2_02_scaffold_6227

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_6227_1
unknown

Not on your lists

comp(96..365)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6227_2
unknown

Not on your lists

comp(404..643)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6227_3
unknown

Not on your lists

comp(736..1104)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6227_4
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1229..2122)
-----------------
DNA (894bp)
protein (298aa)
Sugar-specific transcriptional regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MDH7_HALMO
Sugar-specific transcriptional regulator {ECO:0000313|EMBL:EMA43791.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
transcriptional regulator, TrmB-like
rifcsphigho2_02_scaffold_6227_5
unknown

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2247..2828
-----------------
DNA (582bp)
protein (194aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6227_6

Not on your lists

comp(2839..3384)
-----------------
DNA (546bp)
protein (182aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos31B6 RepID=Q64AK8_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83569.1}; TaxID=285369 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos31B6.;"
rifcsphigho2_02_scaffold_6227_7

Not on your lists

comp(3381..4010)
-----------------
DNA (630bp)
protein (210aa)
Marine sediment metagenome DNA, contig: S01H4_C03348 {ECO:0000313|EMBL:GAG55572.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA polymerase beta domain-containing protein region id=5041659 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_6227_8
unknown

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4137..4514
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6227_9
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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comp(4630..4773)
-----------------
DNA (144bp)
protein (48aa)
50S ribosomal protein L40e {ECO:0000255|HAMAP-Rule:MF_00788}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandleri
rifcsphigho2_02_scaffold_6227_trna_1
unknown

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5287..5369
-----------------
DNA (83bp)
transferRNA
rifcsphigho2_02_scaffold_6227_10
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

5717..6913
-----------------
DNA (1197bp)
protein (399aa)
Metal-dependent phosphohydrolase, HD superfamily n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V1T1_PYRAB
hypothetical protein
Metal-dependent phosphohydrolase, HD superfamily {ECO:0000313|EMBL:CCE69723.1}; Metal-dependent phosphohydrolase, puative, containing HD region {ECO:0000313|EMBL:CAB49268.1}; TaxID=272844 species="Arc
rifcsphigho2_02_scaffold_6227_11
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

Not on your lists


6914..9628
-----------------
DNA (2715bp)
protein (905aa)
BSCG--tRNA--synthetase--alanyl
alaS; alanyl-tRNA ligase (EC:6.1.1.7) Tax=RBG_16_Micrarchaeota_36_9_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
hypothetical protein n=1 Tax=Marine Group I thaumarchaeote SCGC AB-629-I23 RepID=UPI000366A412
rifcsphigho2_02_scaffold_6227_12
unknown

Not on your lists

9707..11107
-----------------
DNA (1401bp)
protein (467aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6227_13
unknown

Not on your lists

11058..11861
-----------------
DNA (804bp)
protein (268aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6227_14

Not on your lists

11954..13996
-----------------
DNA (2043bp)
protein (681aa)
replicative DNA helicase Mcm (EC:3.6.4.-)
MCM family protein; K10726 replicative DNA helicase Mcm [EC:3.6.4.-] id=5241815 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Replicative DNA helicase Mcm {ECO:0000313|EMBL:AJF60806.1}; EC=3.6.4.- {ECO:0000313|EMBL:AJF60806.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_6227_15
unknown

Not on your lists

14086..14715
-----------------
DNA (630bp)
protein (210aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6227_16
unknown

Not on your lists

14712..15425
-----------------
DNA (714bp)
protein (238aa)

This feature has no annotations

rifcsphigho2_02_scaffold_6227_17
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

15511..16380
-----------------
DNA (870bp)
protein (290aa)
hypothetical protein
hypothetical protein id=5241810 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
Displaying 18 items

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