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rifcsphigho2_02_scaffold_15074

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_15074_1
AR11, Woesearchaeaota, DPANN, Archaea

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2..877
-----------------
DNA (876bp)
protein (292aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=AR11
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] id=5049204 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase 1
rifcsphigho2_02_scaffold_15074_2
unknown

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comp(888..1349)
-----------------
DNA (462bp)
protein (154aa)

This feature has no annotations

rifcsphigho2_02_scaffold_15074_3

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comp(1442..2833)
-----------------
DNA (1392bp)
protein (464aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA nucleotidyltransferase (CCA-adding enzyme) id=5799810 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsphigho2_02_scaffold_15074_4
unknown

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3036..3251
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsphigho2_02_scaffold_15074_5
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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3389..4192
-----------------
DNA (804bp)
protein (268aa)
mannose-1-phosphate guanyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
nucleotidyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] id=5048689 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
rifcsphigho2_02_scaffold_15074_6
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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4284..4511
-----------------
DNA (228bp)
protein (76aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
rifcsphigho2_02_scaffold_15074_7

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4511..4861
-----------------
DNA (351bp)
protein (117aa)
Marine sediment metagenome DNA, contig: S06H3_S18551 {ECO:0000313|EMBL:GAI41272.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsphigho2_02_scaffold_15074_8

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4863..6377
-----------------
DNA (1515bp)
protein (505aa)
Phosphomannomutase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LF25_9BACT
Phosphomannomutase {ECO:0000313|EMBL:EQB62989.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
phosphomannomutase
rifcsphigho2_02_scaffold_15074_9
unknown

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comp(6398..7537)
-----------------
DNA (1140bp)
protein (380aa)

This feature has no annotations

rifcsphigho2_02_scaffold_15074_10

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7680..8093
-----------------
DNA (414bp)
protein (138aa)
single-stranded DNA-binding replication protein A, large (70 kD) subunit; K07466 replication factor A1 id=5048480 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor A1 {ECO:0000313|EMBL:KHO45514.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
replication factor A1
rifcsphigho2_02_scaffold_15074_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8127..8681)
-----------------
DNA (555bp)
protein (185aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:AIY84915.1}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279, ECO:0000313|EMBL:AIY84915.1};; TaxID=1415775 species="Bac
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U3A1_9EURY
rifcsphigho2_02_scaffold_15074_12
unknown

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8790..9491
-----------------
DNA (702bp)
protein (234aa)

This feature has no annotations

Displaying 12 items

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