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rifcsphigho2_02_scaffold_10232

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_10232_1
unknown

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comp(1..405)
-----------------
DNA (405bp)
protein (135aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10232_2
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

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comp(499..3315)
-----------------
DNA (2817bp)
protein (939aa)
Archaeal glutamate synthase [NADPH] {ECO:0000256|PIRNR:PIRNR006429}; EC=1.4.1.13 {ECO:0000256|PIRNR:PIRNR006429};; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyr
Archaeal glutamate synthase [NADPH] n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TXV9_METKA
GltB_1; glutamate synthase subunit 2
rifcsphigho2_02_scaffold_10232_3
AR11, Woesearchaeaota, DPANN, Archaea

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3856..4275
-----------------
DNA (420bp)
protein (140aa)
ribosomal protein S6e; K02991 small subunit ribosomal protein S6e Tax=AR11
30S ribosomal protein S6e; K02991 small subunit ribosomal protein S6e id=5044024 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rps6e; 30S ribosomal protein S6e
rifcsphigho2_02_scaffold_10232_4
unknown

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4343..4495
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10232_5

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4673..5905
-----------------
DNA (1233bp)
protein (411aa)
Translation initiation factor 2 subunit gamma id=5800779 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 2 subunit gamma {ECO:0000313|EMBL:AJF62109.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
translation initiation factor 2 subunit gamma
rifcsphigho2_02_scaffold_10232_6
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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comp(5916..6401)
-----------------
DNA (486bp)
protein (162aa)
Nucleic acid-binding protein contains PIN domain-like protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RDN5_ARCPA
hypothetical protein; K07066 Tax=GWA2_Nitrospirae_42_11_curated
nucleic acid-binding protein
rifcsphigho2_02_scaffold_10232_7

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comp(6386..6697)
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M671_HALMO
Uncharacterized protein {ECO:0000313|EMBL:KKN31900.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsphigho2_02_scaffold_10232_8

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comp(6777..7658)
-----------------
DNA (882bp)
protein (294aa)
SAM-dependent methyltransferase id=5799984 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SAM-dependent methyltransferase {ECO:0000313|EMBL:AJF61315.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_02_scaffold_10232_9
unknown

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comp(8704..10038)
-----------------
DNA (1335bp)
protein (445aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10232_10
unknown

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comp(10126..10284)
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10232_11
unknown

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10409..11707
-----------------
DNA (1299bp)
protein (433aa)

This feature has no annotations

rifcsphigho2_02_scaffold_10232_12
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11746..12426
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CM45_MYXFH
Uncharacterized protein {ECO:0000313|EMBL:AKF87255.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
Displaying 12 items

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