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rifcsphigho2_02_scaffold_13448

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_13448_1
GWA2_OP11_46_7, Microgenomates, Bacteria

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comp(37..822)
-----------------
DNA (786bp)
protein (262aa)
3'-5' exoribonuclease Tax=GWA2_OP11_46_7
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal RNA-processing protein RRP42
rifcsphigho2_02_scaffold_13448_2

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comp(828..1544)
-----------------
DNA (717bp)
protein (239aa)
Rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5046926 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex exonuclease Rrp41, exosome complex component RRP41 {ECO:0000313|EMBL:KHO45872.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
exosome complex exonuclease Rrp41
rifcsphigho2_02_scaffold_13448_3

Not on your lists

comp(1643..2383)
-----------------
DNA (741bp)
protein (247aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
rifcsphigho2_02_scaffold_13448_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2578..3300)
-----------------
DNA (723bp)
protein (241aa)
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Woesearch_02
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=5046928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNA-associated protein
rifcsphigho2_02_scaffold_13448_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3379..4125)
-----------------
DNA (747bp)
protein (249aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5046929 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha Tax=AR11
Proteasome subunit alpha
rifcsphigho2_02_scaffold_13448_6
unknown

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comp(4238..4918)
-----------------
DNA (681bp)
protein (227aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13448_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(4926..5336)
-----------------
DNA (411bp)
protein (137aa)
ribonuclease P protein component 2 (EC:3.1.26.5); K03537 ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] Tax=RBG_13_Woesearchaeota_36_6_curated
Ribonuclease P protein component 2
Ribonuclease P protein component 2 id=5046930 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_13448_8
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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comp(5501..5854)
-----------------
DNA (354bp)
protein (118aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E8ADF
hypothetical protein Tax=RBG_13_Nitrospirae_41_22_curated
hypothetical protein
rifcsphigho2_02_scaffold_13448_9
RBG_16_Deltaproteobacteria_42_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5851..6141)
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003765E5A
hypothetical protein Tax=RBG_16_Deltaproteobacteria_42_7_curated
rifcsphigho2_02_scaffold_13448_10
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(6212..6952)
-----------------
DNA (741bp)
protein (247aa)
O-sialoglycoprotein endopeptidase; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=CG_Woesearch_02
O-sialoglycoprotein endopeptidase id=5800366 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
O-sialoglycoprotein endopeptidase
rifcsphigho2_02_scaffold_13448_11
unknown

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comp(7049..8491)
-----------------
DNA (1443bp)
protein (481aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13448_12
unknown

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comp(8606..9466)
-----------------
DNA (861bp)
protein (287aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13448_13
unknown

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comp(9596..10291)
-----------------
DNA (696bp)
protein (232aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13448_14
unknown

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comp(10351..10530)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13448_15
unknown

Not on your lists

comp(10939..12258)
-----------------
DNA (1320bp)
protein (440aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13448_16
unknown

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comp(12255..13052)
-----------------
DNA (798bp)
protein (266aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13448_17
unknown

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13221..13853
-----------------
DNA (633bp)
protein (211aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13448_18
AR4, Woesearchaeaota, DPANN, Archaea

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13981..16098
-----------------
DNA (2118bp)
protein (706aa)
putative hemolysin id=5045996 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative hemolysin Tax=AR4
rifcsphigho2_02_scaffold_13448_19
Saprolegnia diclina, Saprolegnia, Saprolegniales, Eukaryota

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16130..17290
-----------------
DNA (1161bp)
protein (387aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00035C9EFE
Uncharacterized protein {ECO:0000313|EMBL:EQC37933.1}; TaxID=1156394 species="Eukaryota; Stramenopiles; Oomycetes; Saprolegniales; Saprolegniaceae; Saprolegnia.;" source="Saprolegnia diclina VS20.;"
hypothetical protein
Displaying 19 items

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