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rifcsphigho2_02_scaffold_12179

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_12179_1
unknown

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165..524
-----------------
DNA (360bp)
protein (120aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12179_2
CG_Woesearch_01, Woesearchaeota, Archaea

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584..1135
-----------------
DNA (552bp)
protein (184aa)
RDD id=5799579 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_12179_3
AR11, Woesearchaeaota, DPANN, Archaea

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1143..2114
-----------------
DNA (972bp)
protein (324aa)
signal peptide peptidase SppA, 36K type; K04773 protease IV [EC:3.4.21.-] id=5044152 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Protease IV Tax=AR11
Signal peptide peptidase SppA, 36K type
rifcsphigho2_02_scaffold_12179_4
unknown

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comp(2157..2501)
-----------------
DNA (345bp)
protein (115aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12179_5
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2501..3373)
-----------------
DNA (873bp)
protein (291aa)
putative DNA methylase Tax=CG_Ignavi_01
Putative DNA methylase id=3924656 bin=GWF2_Ignavibacteria_35_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
DNA modification methylase
rifcsphigho2_02_scaffold_12179_6
unknown

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comp(3733..4059)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12179_7
AR11, Woesearchaeaota, DPANN, Archaea

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4139..4579
-----------------
DNA (441bp)
protein (147aa)
Uncharacterized protein Tax=AR11
NUDIX hydrolase id=2965904 bin=GWA1_ZB2_49_26 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
NTP pyrophosphohydrolase
rifcsphigho2_02_scaffold_12179_8
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4657..5277
-----------------
DNA (621bp)
protein (207aa)
Uncharacterized protein n=1 Tax=Pseudomonas synxantha BG33R RepID=I4L7C7_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA24670.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chloro
rifcsphigho2_02_scaffold_12179_9
AR4, Woesearchaeaota, DPANN, Archaea

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comp(5310..5552)
-----------------
DNA (243bp)
protein (81aa)
hypothetical protein id=5044933 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
hypothetical protein
rifcsphigho2_02_scaffold_12179_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(5696..6283)
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein; K06384 stage II sporulation protein M Tax=CG_Pacearch_06
hypothetical protein; K06384 stage II sporulation protein M id=5048376 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_12179_11
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6285..6950)
-----------------
DNA (666bp)
protein (222aa)
Conserved hypothetical membrane protein, peptidase family M50 n=1 Tax=uncultured archaeon RepID=D1JE55_9ARCH id=5103755 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved hypothetical membrane protein, peptidase family M50 Tax=AR17
Conserved hypothetical membrane protein, peptidase family M50
rifcsphigho2_02_scaffold_12179_12
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7005..8249)
-----------------
DNA (1245bp)
protein (415aa)
UPF0176 protein Fleli_3244 n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4ANP0_FLELS
Putative sulfurtransferase; K07146 UPF0176 protein Tax=GWB2_Ignavibacteria_35_6b_curated
sulfurtransferase
rifcsphigho2_02_scaffold_12179_13

Not on your lists


comp(8277..8969)
-----------------
DNA (693bp)
protein (231aa)
Marine sediment metagenome DNA, contig: S03H2_L00255 {ECO:0000313|EMBL:GAH34612.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Diphthamide biosynthesis enzyme Dph2 id=5799580 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
diphthamide biosynthesis protein 2-related domain protein
rifcsphigho2_02_scaffold_12179_14
unknown

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comp(9041..9919)
-----------------
DNA (879bp)
protein (293aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12179_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10012..10998)
-----------------
DNA (987bp)
protein (329aa)
cysteine synthase (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
cysteine synthase (EC:2.5.1.47)
Cysteine synthase n=2 Tax=Clostridium RepID=D8GUS8_CLOLD
Displaying 15 items

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