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rifcsphigho2_02_scaffold_12862

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_12862_1
unknown

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comp(3..71)
-----------------
DNA (69bp)
protein (23aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12862_2
unknown

Not on your lists

72..515
-----------------
DNA (444bp)
protein (148aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12862_3
unknown

Not on your lists

697..1413
-----------------
DNA (717bp)
protein (239aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12862_4
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(1476..2465)
-----------------
DNA (990bp)
protein (330aa)
putative AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_13_Pacearchaeota_36_9_curated
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5241813 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_12862_5
unknown

Not on your lists

2622..3125
-----------------
DNA (504bp)
protein (168aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12862_6
unknown

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3122..3418
-----------------
DNA (297bp)
protein (99aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12862_7
RIFOXYB2_FULL_OD1_Uhrbacteria_57_15_curated, Uhrbacteria, Parcubacteria, Bacteria

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3384..4319
-----------------
DNA (936bp)
protein (312aa)
L-asparaginase; K13278 60kDa lysophospholipase [EC:3.1.1.5 3.1.1.47 3.5.1.1] Tax=RIFOXYB2_FULL_OD1_Uhrbacteria_57_15_curated
hypothetical protein id=5093182 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
asg; L-asparaginase I
rifcsphigho2_02_scaffold_12862_8
unknown

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4282..4704
-----------------
DNA (423bp)
protein (141aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12862_9
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4822..5730
-----------------
DNA (909bp)
protein (303aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ICJ0_METNO
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACL57401.1}; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Met
rifcsphigho2_02_scaffold_12862_10
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5764..6717
-----------------
DNA (954bp)
protein (318aa)
Gll3576 protein n=1 Tax=Acetobacter sp. CAG:977 RepID=R5Q186_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KEI68311.1}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126
tetratricopeptide repeat protein
rifcsphigho2_02_scaffold_12862_11
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6841..7326
-----------------
DNA (486bp)
protein (162aa)
Uncharacterized protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JMF2_STREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW99370.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC
rifcsphigho2_02_scaffold_12862_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

7366..7575
-----------------
DNA (210bp)
protein (70aa)
Uncharacterized protein Tax=AR11
rifcsphigho2_02_scaffold_12862_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

7579..7785
-----------------
DNA (207bp)
protein (69aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003680DED
hypothetical protein Tax=AR11
rifcsphigho2_02_scaffold_12862_14

Not on your lists

7804..8292
-----------------
DNA (489bp)
protein (163aa)
asparaginase; K01424 L-asparaginase [EC:3.5.1.1] id=86630 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD56778.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
asparaginase
rifcsphigho2_02_scaffold_12862_15
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8330..9040)
-----------------
DNA (711bp)
protein (237aa)
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Helix-turn-helix, Fis-type Tax=AR4
rifcsphigho2_02_scaffold_12862_16

Not on your lists

9189..12824
-----------------
DNA (3636bp)
protein (1212aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52277.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsphigho2_02_scaffold_12862_17
unknown

Not on your lists

comp(12862..13296)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12862_18
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13478..14068
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=Microchaete sp. PCC 7126 RepID=UPI00034CFEFF
hypothetical protein; K09134 hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
hypothetical protein
Displaying 18 items

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