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rifcsphigho2_02_scaffold_16694

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_16694_1

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comp(2..2071)
-----------------
DNA (2070bp)
protein (690aa)
Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:KHO46063.1}; EC=6.3.5.5 {ECO:0000313|EMBL:KHO46063.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
carB; Carbamoylphosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=5046262 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
carbamoyl phosphate synthase large subunit
rifcsphigho2_02_scaffold_16694_2
unknown

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comp(2258..3604)
-----------------
DNA (1347bp)
protein (449aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16694_3

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comp(3872..4966)
-----------------
DNA (1095bp)
protein (365aa)
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=5046264 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carA; carbamoylphosphate synthase small subunit
rifcsphigho2_02_scaffold_16694_4
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5283..5834)
-----------------
DNA (552bp)
protein (184aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369D442
transposase IS4 family protein Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_16694_5

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6027..6590
-----------------
DNA (564bp)
protein (188aa)
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46067.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_16694_6

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6677..6904
-----------------
DNA (228bp)
protein (76aa)
id=5046266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46067.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_16694_7

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6972..7397
-----------------
DNA (426bp)
protein (142aa)
Marine sediment metagenome DNA, contig: S12H4_S12223 {ECO:0000313|EMBL:GAJ07382.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
id=5046267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_16694_8
unknown

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comp(7526..7660)
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

rifcsphigho2_02_scaffold_16694_9
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7684..8646)
-----------------
DNA (963bp)
protein (321aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048515 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_16694_10

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8814..9242
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein
Uncharacterized protein id=5799933 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61264.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Displaying 10 items

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