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rifcsphigho2_02_scaffold_14119

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_14119_1
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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2..520
-----------------
DNA (519bp)
protein (173aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BEQ6_9EURY
Putative uncharacterized protein Tax=GWA2_OD1_40_9
hypothetical protein
rifcsphigho2_02_scaffold_14119_2
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(539..1261)
-----------------
DNA (723bp)
protein (241aa)
circadian clock protein KaiC Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
hypothetical protein id=5048072 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_14119_3
CG_OP9-01, Atribacteria, Bacteria

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comp(1580..2044)
-----------------
DNA (465bp)
protein (155aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U349_9CHLR
YbaK/prolyl-tRNA synthetase associated domain-containing protein Tax=CG_OP9-01
YbaK/prolyl-tRNA synthetase associated domain-containing protein
rifcsphigho2_02_scaffold_14119_4
unknown

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comp(2053..2403)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14119_5
unknown

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comp(2770..3207)
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14119_6
unknown

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comp(3487..3939)
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14119_7

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comp(4184..4813)
-----------------
DNA (630bp)
protein (210aa)
Bacterio-opsin activator-like protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPG9_HALMO
Transcription regulator-like protein {ECO:0000313|EMBL:KHO55428.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
bacterio-opsin activator HTH domain-containing protein
rifcsphigho2_02_scaffold_14119_8
CG_Woesearch_02, Woesearchaeota, Archaea

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5205..6308
-----------------
DNA (1104bp)
protein (368aa)
peptide chain release factor 1; K03265 peptide chain release factor subunit 1 Tax=CG_Woesearch_02
peptide chain release factor subunit 1; K03265 peptide chain release factor subunit 1 id=5045856 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
eRF1; peptide chain release factor 1
rifcsphigho2_02_scaffold_14119_9
unknown

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6397..6996
-----------------
DNA (600bp)
protein (200aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14119_10
CG_Woesearch_02, Woesearchaeota, Archaea

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7063..7956
-----------------
DNA (894bp)
protein (298aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5045855 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_14119_11
CG_Pacearch_04, Pacearchaeota, Archaea

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8065..8277
-----------------
DNA (213bp)
protein (71aa)
Histone, HmtA n=4 Tax=Methanobrevibacter RepID=A5ULH1_METS3 id=5103251 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
archaeal histone Tax=CG_Pacearch_04
Histone, HmtA
rifcsphigho2_02_scaffold_14119_12

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8479..8877
-----------------
DNA (399bp)
protein (133aa)
Marine sediment metagenome DNA, contig: S01H1_S10434 {ECO:0000313|EMBL:GAG01596.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Translation initiation factor 5A id=5800376 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Translation initiation factor 5A
rifcsphigho2_02_scaffold_14119_13

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9191..10363
-----------------
DNA (1173bp)
protein (391aa)
Predicted membrane-associated Zn-dependent protease id=5800378 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative membrane-associated Zn-dependent protease {ECO:0000313|EMBL:AJF61709.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Peptidase M50
rifcsphigho2_02_scaffold_14119_14
unknown

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comp(10379..10846)
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14119_15
unknown

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comp(10846..11448)
-----------------
DNA (603bp)
protein (201aa)

This feature has no annotations

rifcsphigho2_02_scaffold_14119_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(11765..12283)
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035F75AC
AsnC/Lrp family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
AsnC family transcriptional regulator
Displaying 16 items

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