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rifcsphigho2_02_scaffold_23375

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_23375_1
unknown

Not on your lists

3..962
-----------------
DNA (960bp)
protein (320aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23375_2
unknown

Not on your lists

1108..2109
-----------------
DNA (1002bp)
protein (334aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23375_3
unknown

Not on your lists

2332..4062
-----------------
DNA (1731bp)
protein (577aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23375_4
unknown

Not on your lists

4154..5110
-----------------
DNA (957bp)
protein (319aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23375_5
R_OD1_48_14, Parcubacteria, Bacteria

Not on your lists

comp(5144..6577)
-----------------
DNA (1434bp)
protein (478aa)
id=5049664 Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
id=5049664 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_23375_6
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(6706..7296)
-----------------
DNA (591bp)
protein (197aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIR6_THEBM id=5103832 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_04
hypothetical protein
rifcsphigho2_02_scaffold_23375_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(7445..8107)
-----------------
DNA (663bp)
protein (221aa)
hypothetical protein Tax=CG_Woesearch_01
ArsR family transcriptional regulator id=5050187 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_23375_8
unknown

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8237..8512
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

rifcsphigho2_02_scaffold_23375_9
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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8804..9370
-----------------
DNA (567bp)
protein (189aa)
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AJM92485.1}; TaxID=1582439 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. D3C.
Uncharacterized protein id=4010368 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_02_scaffold_23375_10

Not on your lists

9480..9887
-----------------
DNA (408bp)
protein (136aa)
secE; preprotein translocase subunit SecE; K07342 protein transport protein SEC61 subunit gamma and related proteins id=5043663 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1579365 species="Archaea.;" source="a
secE; preprotein translocase subunit SecE
rifcsphigho2_02_scaffold_23375_11

Not on your lists


9940..10542
-----------------
DNA (603bp)
protein (201aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_02_scaffold_23375_12

Not on your lists


10637..11419
-----------------
DNA (783bp)
protein (261aa)
Large subunit ribosomal protein L11 {ECO:0000313|EMBL:KHO46636.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl11p; 50S ribosomal protein L11P
rifcsphigho2_02_scaffold_23375_13
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

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comp(11491..12522)
-----------------
DNA (1032bp)
protein (344aa)
RNA ligase, DRB0094 family Tax=RIFOXYB2_FULL_RIF07_49_35_curated
hypothetical protein GobsU_00775 id=2995520 bin=GWF2_Bacteroidetes_35_48 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
RNA ligase, DRB0094 family
rifcsphigho2_02_scaffold_23375_14
unknown

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comp(12575..12934)
-----------------
DNA (360bp)
protein (120aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBW5_9ARCH Tax=AR20
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBW5_9ARCH id=5103061 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsphigho2_02_scaffold_23375_15
unknown

Not on your lists

comp(13039..13383)
-----------------
DNA (345bp)
protein (115aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBW5_9ARCH id=5103061 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JBW5_9ARCH Tax=AR20
hypothetical protein
rifcsphigho2_02_scaffold_23375_16
Rasamsonia emersonii, Rasamsonia, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

comp(13863..17276)
-----------------
DNA (3414bp)
protein (1138aa)
Uncharacterized protein {ECO:0000313|EMBL:KKA18396.1}; Flags: Fragment;; TaxID=1408163 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Tri
rifcsphigho2_02_scaffold_23375_17
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17617..17901)
-----------------
DNA (285bp)
protein (95aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B4A7FD
KilA-N domain-containing protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
KilA-N domain-containing protein
rifcsphigho2_02_scaffold_23375_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(18026..18544)
-----------------
DNA (519bp)
protein (173aa)
Marine sediment metagenome DNA, contig: S01H1_S23064 Tax=CG_Woesearch_02
Displaying 18 items

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