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rifcsphigho2_02_scaffold_2550

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2550_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(27..782)
-----------------
DNA (756bp)
protein (252aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Woesearch_02
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=5044051 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Ribonuclease
rifcsphigho2_02_scaffold_2550_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(827..1759)
-----------------
DNA (933bp)
protein (311aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
lby:Lbys_0183 kila-n, DNA-binding domain id=720485 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria rbh
hypothetical protein
rifcsphigho2_02_scaffold_2550_3
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

2101..2664
-----------------
DNA (564bp)
protein (188aa)
yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP:cob(I)alamin adenosyltransferase-like protein n=1 Tax=Paenibacillus larvae RepID=UPI0001F85A56
ATP-binding cobalamin adenosyltransferase Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
rifcsphigho2_02_scaffold_2550_4
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(2733..3113)
-----------------
DNA (381bp)
protein (127aa)
Ferric uptake regulation protein n=2 Tax=Clostridium botulinum RepID=C5VSB0_CLOBO
Fur family ferric uptake regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RBG_13_Chloroflexi_54_9_curated
Fur family ferric uptake regulator
rifcsphigho2_02_scaffold_2550_5
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

3263..3544
-----------------
DNA (282bp)
protein (94aa)
id=5044633 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_02_scaffold_2550_6

Not on your lists

comp(3577..5085)
-----------------
DNA (1509bp)
protein (503aa)
MiaB-like tRNA modifying enzyme id=5048683 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
MiaB-like protein tRNA modifying enzyme {ECO:0000313|EMBL:KHO45346.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
MiaB-like tRNA modifying enzyme
rifcsphigho2_02_scaffold_2550_7
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5375..5821)
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DB48_9BACT
Putative uncharacterized protein Tax=GWA2_OP11_38_24
hypothetical protein
rifcsphigho2_02_scaffold_2550_8
unknown

Not on your lists

comp(6034..6870)
-----------------
DNA (837bp)
protein (279aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_9
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6960..7610)
-----------------
DNA (651bp)
protein (217aa)
HAD-superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily Tax=CG_Desulfob_01
HAD-superfamily hydrolase, subfamily IA, variant 3 id=4330763 bin=GWC2_OP3_44_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
HAD-superfamily hydrolase
rifcsphigho2_02_scaffold_2550_10
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

7680..8903
-----------------
DNA (1224bp)
protein (408aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12); K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=CG_Woesearch_01
hypothetical protein; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5041681 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
tRNA pseudouridine synthase D
rifcsphigho2_02_scaffold_2550_11
unknown

Not on your lists

8963..10009
-----------------
DNA (1047bp)
protein (349aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_12
unknown

Not on your lists

10109..10519
-----------------
DNA (411bp)
protein (137aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_13
unknown

Not on your lists

10567..10884
-----------------
DNA (318bp)
protein (106aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_14
unknown

Not on your lists

11012..11320
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_15
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11415..12758)
-----------------
DNA (1344bp)
protein (448aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_16_Deltaproteobacteria_50_11_curated
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=24413757 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
rifcsphigho2_02_scaffold_2550_16
Chelonia mydas, Chelonia, Testudines, Chordata, Metazoa

Not on your lists

12896..16585
-----------------
DNA (3690bp)
protein (1230aa)
Uncharacterized protein n=1 Tax=Chelonia mydas RepID=M7BF15_CHEMY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMP36541.1}; TaxID=8469 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudines; Cryptodira; Durocryptodira; Amer
rifcsphigho2_02_scaffold_2550_17
unknown

Not on your lists

16699..16962
-----------------
DNA (264bp)
protein (88aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_18
unknown

Not on your lists

17162..18085
-----------------
DNA (924bp)
protein (308aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_19
Bacillus nealsonii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18143..18946)
-----------------
DNA (804bp)
protein (268aa)
Octanoyltransferase LipM {ECO:0000256|HAMAP-Rule:MF_02118}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_02118};; Octanoyl-[acyl-carrier-protein]:[GcvH] N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_021
Octanoyltransferase LipM n=1 Tax=Bacillus nealsonii AAU1 RepID=R9C385_9BACI
biotin/lipoate A/B protein ligase
rifcsphigho2_02_scaffold_2550_20
unknown

Not on your lists

comp(19016..19879)
-----------------
DNA (864bp)
protein (288aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_21

Not on your lists

comp(19900..21042)
-----------------
DNA (1143bp)
protein (381aa)
Proline dehydrogenase n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PN63_MEIRD
Uncharacterized protein {ECO:0000313|EMBL:KKN64589.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
proline dehydrogenase
rifcsphigho2_02_scaffold_2550_22
unknown

Not on your lists

21147..22250
-----------------
DNA (1104bp)
protein (368aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_23
unknown

Not on your lists

comp(22493..23698)
-----------------
DNA (1206bp)
protein (402aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2550_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(23795..24802)
-----------------
DNA (1008bp)
protein (336aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic
Lipoyl synthase n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YA94_ANEAE
lipoyl synthase
rifcsphigho2_02_scaffold_2550_25
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(24868..26415)
-----------------
DNA (1548bp)
protein (516aa)
GcvP; glycine dehydrogenase subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=CG_Micra_01
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
glycine dehydrogenase (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] id=5240855 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Displaying 25 items

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