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rifcsphigho2_02_scaffold_7742

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7742_1
R_WWE3_39_13, WWE3, Bacteria

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comp(2..412)
-----------------
DNA (411bp)
protein (137aa)
Tax=RIFCSPLOWO2_01_FULL_WWE3_39_13_curated
rifcsphigho2_02_scaffold_7742_2
AR15, Woesearchaeaota, DPANN, Archaea

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comp(464..1300)
-----------------
DNA (837bp)
protein (279aa)
Endonuclease IV id=5799995 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Endonuclease IV Tax=AR15
hypothetical protein
rifcsphigho2_02_scaffold_7742_3
AR4, Woesearchaeaota, DPANN, Archaea

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1441..2193
-----------------
DNA (753bp)
protein (251aa)
glutamine amidotransferase id=5044169 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
glutamine amidotransferase Tax=AR4
glutamine amidotransferase
rifcsphigho2_02_scaffold_7742_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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2288..3991
-----------------
DNA (1704bp)
protein (568aa)
sdhA; succinate dehydrogenase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1)
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JJT4_SYNJB
rifcsphigho2_02_scaffold_7742_5
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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4019..5146
-----------------
DNA (1128bp)
protein (376aa)
Succinate dehydrogenase, Fe-S protein subunit {ECO:0000313|EMBL:CCQ92040.1}; EC=1.3.99.1 {ECO:0000313|EMBL:CCQ92040.1};; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitro
succinate dehydrogenase subunit B (EC:1.3.5.1)
Succinate dehydrogenase, Fe-S protein subunit n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YNE9_9BACT
rifcsphigho2_02_scaffold_7742_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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5164..6294
-----------------
DNA (1131bp)
protein (377aa)
sdhE; succinate dehydrogenase subunit C (EC:1.3.99.1); K03389 heterodisulfide reductase subunit B [EC:1.8.98.1] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
succinate dehydrogenase subunit C (EC:1.3.5.1)
Succinate dehydrogenase subunit C n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z268_CYAAP
rifcsphigho2_02_scaffold_7742_7
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

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6371..7462
-----------------
DNA (1092bp)
protein (364aa)
Cobalamin synthesis protein P47K n=1 Tax=Calothrix sp. PCC 6303 RepID=K9V7S7_9CYAN
cobalamin synthesis protein P47K
Cobalamin synthesis protein P47K {ECO:0000313|EMBL:AFZ03492.1}; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
rifcsphigho2_02_scaffold_7742_8
Pan troglodytes, Pan, Primates, Mammalia, Chordata, Metazoa

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7478..8044
-----------------
DNA (567bp)
protein (189aa)
PREDICTED: keratin, type I cytoskeletal 9-like n=1 Tax=Monodelphis domestica RepID=UPI00020F61B4
Uncharacterized protein {ECO:0000313|Ensembl:ENSPTRP00000015566}; TaxID=9598 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates;
ssb; ssDNA-binding protein
rifcsphigho2_02_scaffold_7742_9

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8103..8675
-----------------
DNA (573bp)
protein (191aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B695_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD64143.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ydeN; putative sulfatase
rifcsphigho2_02_scaffold_7742_10
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

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8965..10338
-----------------
DNA (1374bp)
protein (458aa)
malic enzyme (EC:1.1.1.40); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=GWF2_Lentisphaerae_50_93_curated
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase id=3321922 bin=GWF2_Lentisphaerae_50_93 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S rbh
maeB; Malic enzyme
rifcsphigho2_02_scaffold_7742_11
unknown

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10521..11018
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7742_12
R_OD1_Nomurabacteria_36_29, Nomurabacteria, Parcubacteria, Bacteria

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comp(11030..12076)
-----------------
DNA (1047bp)
protein (349aa)
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated
Transcriptional regulator id=5240686 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsphigho2_02_scaffold_7742_13
unknown

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12341..12841
-----------------
DNA (501bp)
protein (167aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7742_14

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13147..18120
-----------------
DNA (4974bp)
protein (1658aa)
hypothetical protein id=5044656 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46181.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Displaying 14 items

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