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rifcsphigho2_02_scaffold_30216

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_30216_1
CG_Woesearch_03, Woesearchaeota, Archaea

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160..546
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein
id=5048723 Tax=CG_Woesearch_03
id=5048723 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_30216_2
CG_Woesearch_03, Woesearchaeota, Archaea

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537..1538
-----------------
DNA (1002bp)
protein (334aa)
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein id=5048722 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_30216_3
CG_Woesearch_03, Woesearchaeota, Archaea

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1542..2267
-----------------
DNA (726bp)
protein (242aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1CX00_9ZZZZ
Uncharacterized protein Tax=CG_Woesearch_03
hypothetical protein
rifcsphigho2_02_scaffold_30216_4
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

2249..2569
-----------------
DNA (321bp)
protein (107aa)
id=5048719 Tax=CG_Woesearch_03
id=5048719 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_30216_5

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2581..2808
-----------------
DNA (228bp)
protein (76aa)
id=5048720 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45383.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_30216_6
Methanosarcina sp. 1.H.T.1A.1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3072..4178
-----------------
DNA (1107bp)
protein (369aa)
Sodium bile acid symporter family protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TJ43_METAC
Arsenic transporter {ECO:0000313|EMBL:KKH99962.1}; TaxID=1483602 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1
sodium bile acid symporter family protein
rifcsphigho2_02_scaffold_30216_7
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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4231..4650
-----------------
DNA (420bp)
protein (140aa)
Trx-linked arsenate reductase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A555_THESM
Trx-linked arsenate reductase
Trx-linked arsenate reductase {ECO:0000313|EMBL:BAD85032.1}; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus kodakarensi
rifcsphigho2_02_scaffold_30216_8
AR11, Woesearchaeaota, DPANN, Archaea

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4647..6029
-----------------
DNA (1383bp)
protein (461aa)
Amino acid permease-associated region n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AV37_9ARCH
Amino acid transporter Tax=AR11
Amino acid permease
rifcsphigho2_02_scaffold_30216_9
R_Peregrinibacteria_48_14, Peregrinibacteria, Bacteria

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6216..6629
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037CF883
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Peregrinibacteria_48_14_curated
rifcsphigho2_02_scaffold_30216_10
RBG_13_OD1_48_8_curated, Parcubacteria, Bacteria

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6710..7264
-----------------
DNA (555bp)
protein (185aa)
vitamin K epoxide reductase Tax=RBG_13_OD1_48_8_curated
rifcsphigho2_02_scaffold_30216_11

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7297..7728
-----------------
DNA (432bp)
protein (144aa)
Protein involved in disulfide bond formation id=5799831 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Protein involved in disulfide bond formation {ECO:0000313|EMBL:AJF61162.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_02_scaffold_30216_12

Not on your lists

7807..8520
-----------------
DNA (714bp)
protein (238aa)
Cytochrome c biogenesis protein transmembrane region id=5799832 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AJF61163.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
cytochrome c biogenesis transmembrane protein
rifcsphigho2_02_scaffold_30216_13
GWA2_RIF01_43_8_curated, RIF1, Bacteria

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8605..9165
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D7568
hypothetical protein Tax=GWA2_RIF01_43_8_curated
rifcsphigho2_02_scaffold_30216_14
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

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comp(9193..9630)
-----------------
DNA (438bp)
protein (146aa)
collagenase; K08303 putative protease [EC:3.4.-.-] id=5048279 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
peptidase U32 Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
peptidase U32
Displaying 14 items

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