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rifcsphigho2_02_scaffold_28667

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_28667_1
AR4, Woesearchaeaota, DPANN, Archaea

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76..720
-----------------
DNA (645bp)
protein (215aa)
seg id=5041693 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsphigho2_02_scaffold_28667_2
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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965..1225
-----------------
DNA (261bp)
protein (87aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TX05_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KHE92531.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="
conserved membrane protein of unknown function
rifcsphigho2_02_scaffold_28667_trna_1
unknown

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comp(1270..1364)
-----------------
DNA (95bp)
transferRNA
rifcsphigho2_02_scaffold_28667_3
unknown

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1461..1841
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsphigho2_02_scaffold_28667_4
R_RIF_OD1_09_51_11, RIF-OD1-9, Parcubacteria, Bacteria

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1940..3400
-----------------
DNA (1461bp)
protein (487aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_51_11_curated
Putative dihydrolipoamide dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP2_NITGG
putative dihydrolipoamide dehydrogenase
rifcsphigho2_02_scaffold_28667_5
CG_Woesearch_02, Woesearchaeota, Archaea

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3468..4340
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein Tax=CG_Woesearch_02
RNA-binding protein snRNP-like protein id=5043944 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_28667_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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4345..5220
-----------------
DNA (876bp)
protein (292aa)
Conserved hypothetical membrane protein, DUF6 family n=1 Tax=uncultured archaeon RepID=D1JG52_9ARCH id=87144 bin=ACD58 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_28667_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5217..6158
-----------------
DNA (942bp)
protein (314aa)
Sugar kinase, YjeF-related protein family Tax=AR11
carbohydrate kinase
carbohydrate kinase id=5240577 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_28667_8
unknown

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comp(6177..7178)
-----------------
DNA (1002bp)
protein (334aa)

This feature has no annotations

rifcsphigho2_02_scaffold_28667_9
unknown

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7360..7641
-----------------
DNA (282bp)
protein (94aa)

This feature has no annotations

rifcsphigho2_02_scaffold_28667_10
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

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7719..9074
-----------------
DNA (1356bp)
protein (452aa)
MATE efflux family protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A8H3_NATTJ rbh
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ACB85857.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermoph
rifcsphigho2_02_scaffold_28667_11
unknown

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9180..10154
-----------------
DNA (975bp)
protein (325aa)

This feature has no annotations

rifcsphigho2_02_scaffold_28667_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(10156..10800)
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Putative uncharacterized protein id=4889173 bin=GWC2_Syntrophobacterales_56_13 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
metal dependent hydrolase
rifcsphigho2_02_scaffold_28667_13
RLO_OD1_Nomurabacteria_44_11, Nomurabacteria, Parcubacteria, Bacteria

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10880..12058
-----------------
DNA (1179bp)
protein (393aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P851_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_44_11_curated
hypothetical protein
rifcsphigho2_02_scaffold_28667_14
unknown

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comp(12059..12526)
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

rifcsphigho2_02_scaffold_28667_15
unknown

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comp(12596..13945)
-----------------
DNA (1350bp)
protein (450aa)

This feature has no annotations

Displaying 16 items

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