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rifcsphigho2_02_scaffold_19471

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_19471_1
CG_Woesearch_02, Woesearchaeota, Archaea

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1..1026
-----------------
DNA (1026bp)
protein (342aa)
replication factor C large subunit; K04800 replication factor C large subunit Tax=CG_Woesearch_02
Replication factor C large subunit id=5799900 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
replication factor C large subunit
rifcsphigho2_02_scaffold_19471_2
unknown

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1094..1444
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19471_3
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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1642..5109
-----------------
DNA (3468bp)
protein (1156aa)
Subtilisin-like serine proteases (Peptidase S8 family) n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I699_METCZ
Subtilisin-like serine proteases (peptidase S8 family)
Subtilisin-like serine proteases (Peptidase S8 family) {ECO:0000313|EMBL:AFD00746.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;"
rifcsphigho2_02_scaffold_19471_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5106..6689
-----------------
DNA (1584bp)
protein (528aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI0002EF77C8
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_02_scaffold_19471_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6686..10774
-----------------
DNA (4089bp)
protein (1363aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CZK3_9EURY
CARDB domain-containing protein {ECO:0000313|EMBL:KCZ70834.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanopere
conserved hypothetical protein containing von Willebrand factor type A
rifcsphigho2_02_scaffold_19471_6
unknown

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10771..11343
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19471_7
unknown

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11357..11788
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19471_8
GWA2_OP11_40_7b, Woesebacteria, Microgenomates, Bacteria

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comp(11858..12244)
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR73123.1}; TaxID=1618562 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA2_40_7.;"
id=5800737 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_19471_9
unknown

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12594..12950
-----------------
DNA (357bp)
protein (119aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19471_10
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12998..13657
-----------------
DNA (660bp)
protein (220aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Rumin
tRNA-dihydrouridine synthase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2P6_CLOCD
tRNA-U20-dihydrouridine synthase
rifcsphigho2_02_scaffold_19471_11
unknown

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13684..13974
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19471_12

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14108..15433
-----------------
DNA (1326bp)
protein (442aa)
ilvE; branched-chain-amino-acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] id=5049177 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KHO45168.1}; EC=2.6.1.42 {ECO:0000313|EMBL:KHO45168.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ilvE; branched-chain amino acid aminotransferase
rifcsphigho2_02_scaffold_19471_13
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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15753..17246
-----------------
DNA (1494bp)
protein (498aa)
Aldehyde dehydrogenase id=3339747 bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
aldehyde Dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Aldehyde Dehydrogenase
rifcsphigho2_02_scaffold_19471_14
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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17386..19038
-----------------
DNA (1653bp)
protein (551aa)
ilvB; acetolactate synthase; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U723_CYAP2
thiamine pyrophosphate domain-containing TPP-binding protein
rifcsphigho2_02_scaffold_19471_15
unknown

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comp(19074..19898)
-----------------
DNA (825bp)
protein (275aa)

This feature has no annotations

rifcsphigho2_02_scaffold_19471_16

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19996..20589
-----------------
DNA (594bp)
protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51308.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
id=5045972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_19471_17
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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20663..21265
-----------------
DNA (603bp)
protein (201aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003780A24
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
rifcsphigho2_02_scaffold_19471_18
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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21262..21474
-----------------
DNA (213bp)
protein (71aa)
Tax=CG_Aenigma_01
rifcsphigho2_02_scaffold_19471_19
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

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21701..22006
-----------------
DNA (306bp)
protein (102aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Brevibacillus sp. phR RepID=UPI0003675686
5-methyltetrahydrofolate--homocysteine methyltransferase Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
methionine synthase
Displaying 19 items

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