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rifcsphigho2_02_scaffold_57396

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_57396_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3..1613)
-----------------
DNA (1611bp)
protein (537aa)
ERCC2/XPD/Rad3-related DNA repair helicase; K10844 DNA excision repair protein ERCC-2 [EC:3.6.4.12] id=5045763 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA repair helicase rad3 Tax=CG_Woesearch_02
ATP dependent helicase
rifcsphigho2_02_scaffold_57396_2
CG_Woesearch_01, Woesearchaeota, Archaea

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1822..2091
-----------------
DNA (270bp)
protein (90aa)
hypothetical protein
hypothetical protein Tax=CG_Woesearch_01
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_57396_3
unknown

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comp(2130..2543)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsphigho2_02_scaffold_57396_4
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2540..4495)
-----------------
DNA (1956bp)
protein (652aa)
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
DNA gyrase subunit B id=3095073 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
gyrB; DNA gyrase subunit B
rifcsphigho2_02_scaffold_57396_5
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4907..5377)
-----------------
DNA (471bp)
protein (157aa)
Leucine-responsive regulatory protein AsnC/Lrp n=4 Tax=Pseudomonas syringae RepID=L8N629_PSESY
Putative leucine-responsive regulatory protein, AsnC family {ECO:0000313|EMBL:EPF64378.1}; TaxID=1262350 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseu
lrp; leucine-responsive regulatory protein
rifcsphigho2_02_scaffold_57396_6
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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5456..5794
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6UN86_9EURY
hypothetical protein
Partial alanyl-tRNA synthetase matches COOH terminus {ECO:0000313|EMBL:AAL80552.1}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Py
Displaying 6 items

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