ggKbase home page

rifcsphigho2_02_scaffold_13590_22

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_37_9

near complete RP 35 / 55 MC: 3 BSCG 10 / 51 MC: 1 ASCG 32 / 38 MC: 1
Location: comp(19173..20975)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 600.0
  • Bit_score: 936
  • Evalue 2.40e-269
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 601.0
  • Bit_score: 898
  • Evalue 3.90e-258
DNA-directed RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 600.0
  • Bit_score: 825
  • Evalue 1.20e-236

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR11 → Archaea

Sequences

DNA sequence
Length: 1803
ATGACTGATGTATATGTGAACGGAAGATTTACTGGGACAGTAGAAGACGGAAGAGAGTTTGTGAATAATGCAAGAAGCGAAAGAAGAAGAGGCAACCTTACTGACAATGCTAACCTTTACTACAACGAATTAAGCGACGAAGTATTTGTTGAATGTGGAAGAGGAAGAGCAAGAAGACCATTGATTGTCGTGAAAGATGGGCAATCATCATTAACAGAGCAACAAATTAAACAGCTTGAGAAAAATGAGATCGGCTGGAATGACCTGGTAAAGCAAGGAACAATAGAATACCTAGATGCTGCAGAAGAAGAGAATACATTAGTAGCGTTTTTTGATCATGAACTAACACCTGAACATACTCATCTTGAGATAATGCCATTGACCATGCTTGGATTAACAACTGCATTAGTACCATATGGTAATTTCAACCAAAGCACAAGATTAAATGCAGGAAGCAAGAACCAAAAGCAAGCCCTTGGATTTTATGCTGCAAACTTTTCATTAAGGATGGACATGGACGTAAATTTACTGCAGTATTCGCAAAAACCGATAGTAAATACAATCATGCATGAGATTTCTGATTATGACAAGCATCCTGCAGGCCAAAATATTGTTGTTGCTATCATGAGCTATGAAGGATATAATATGGAAGATGCGATCATATTAAATCGTGGTTCTGTCGATAGAGGATTAGGAAGAAGCACATATTTCAGGCCAGCAATCGCTGAAGAGCTTAGATATGCAGGAGGATTAGTAGATGAAGTATGTGTGCCTGATAAAGAAGTCAAAGGATATAAAGCTGAAAGAGATTATAGGTTTTTGGAAGAAGACGGAATAATCTCGCCTGAAAGCGCAGTAGCTGAAGGAGATGTTATCATAGGAAAAACCTCTCCGCCTAGATTCTTAAGCAGCTTAGATGAATATAATCTAGCTGCTGCAACAAGAAGAGAAAGCTCAGTTGCAATGAGACATGGTGAAGAAGGGATAGTTGATTTTGTACTTATAACAGAAAATGAAGAAGGAAATAAGCTGATACAAGTAAGGATAAGAGACCAAAGAATTCCAGAGATAGGAGATAAGTTCACAAGCAGGCATGGGCAAAAAGGAGTAGTTGGCCTGATAGTAAATGAAGAGGATATGCCATTTTCAAGCTCAGGCATAAAGCCAGATATCATCTTCTCACCGCATGGTATACCAAGCAGAATGACAATCTCGCATCTGATCGAGCTAGTAGGAGGCAAAGTAGGAGCACTAGCTGGAAGATATATCAACGGCACTACATTTGACGCTGAAAATATTGATGACCTTAGAAAAGAGCTAGTAAGCTTAGGATTTGCTGAGAACTGCACTGAAACCTTGTTCAATGGACATACAGGAGAAATGTTCACTGCAAGAATATTTGTCGGCAATATGTATTATATGAAATTAAAGCATATGGTTGCAAACAAAATACATTCCAGAGCACGCGGTCCAATACAATTATTGACAAGACAGCCTACTGAAGGAAGAGCAAAAGAAGGCGGATTAAGATTAGGGGAGATGGAAAAAGATACATTTGTAGCGCATGGAGCAAGCTTATTGCTGAAAGAAAGATTTGACAGCGATAAGACAATCGTGCCAGTGTGCGAAGAGTGTGGCTTGATAGCTATCCATGATGAGTTCAAGAACAAGAGCTATTGCCCGATCTGCGGAGATAATGTTGAGATAACCAACATTGAGATGTCATATGCGTTTAAGCTGATGTTAGATGAGTTCAAAAGCTTAGGCATATACACTAAGCTGCAACTGAAGTATAAGTATTGA
PROTEIN sequence
Length: 601
MTDVYVNGRFTGTVEDGREFVNNARSERRRGNLTDNANLYYNELSDEVFVECGRGRARRPLIVVKDGQSSLTEQQIKQLEKNEIGWNDLVKQGTIEYLDAAEEENTLVAFFDHELTPEHTHLEIMPLTMLGLTTALVPYGNFNQSTRLNAGSKNQKQALGFYAANFSLRMDMDVNLLQYSQKPIVNTIMHEISDYDKHPAGQNIVVAIMSYEGYNMEDAIILNRGSVDRGLGRSTYFRPAIAEELRYAGGLVDEVCVPDKEVKGYKAERDYRFLEEDGIISPESAVAEGDVIIGKTSPPRFLSSLDEYNLAAATRRESSVAMRHGEEGIVDFVLITENEEGNKLIQVRIRDQRIPEIGDKFTSRHGQKGVVGLIVNEEDMPFSSSGIKPDIIFSPHGIPSRMTISHLIELVGGKVGALAGRYINGTTFDAENIDDLRKELVSLGFAENCTETLFNGHTGEMFTARIFVGNMYYMKLKHMVANKIHSRARGPIQLLTRQPTEGRAKEGGLRLGEMEKDTFVAHGASLLLKERFDSDKTIVPVCEECGLIAIHDEFKNKSYCPICGDNVEITNIEMSYAFKLMLDEFKSLGIYTKLQLKYKY*