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rifcsphigho2_02_scaffold_13590

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_13590_1
unknown

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2..94
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13590_2

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182..868
-----------------
DNA (687bp)
protein (229aa)
V-type ATP synthase subunit I (EC:3.6.3.14); K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] id=5046365 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type H+-transporting ATPase subunit I {ECO:0000313|EMBL:KHO46166.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KHO46166.1};; Flags: Fragment;; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
V-type ATPase 116 kDa subunit
rifcsphigho2_02_scaffold_13590_3

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1008..2033
-----------------
DNA (1026bp)
protein (342aa)
V-type ATP synthase subunit I (EC:3.6.3.14); K02123 V-type H+-transporting ATPase subunit I [EC:3.6.3.14] id=5044029 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
V-type ATP synthase subunit I (EC:3.6.3.14)
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_13590_4

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2261..2491
-----------------
DNA (231bp)
protein (77aa)
A1AO H+ ATPase subunit K (EC:3.6.3.14); K02124 V-type H+-transporting ATPase subunit K [EC:3.6.3.14] id=5042345 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type H+-transporting ATPase subunit K {ECO:0000313|EMBL:KHO46843.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KHO46843.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
V-type ATP synthase subunit K
rifcsphigho2_02_scaffold_13590_5

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2545..3114
-----------------
DNA (570bp)
protein (190aa)
H+transporting two-sector ATPase E subunit; K02121 V-type H+-transporting ATPase subunit E [EC:3.6.3.14] id=5042344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Archaeal/vacuolar-type H+-ATPase subunit E
rifcsphigho2_02_scaffold_13590_6

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3204..4328
-----------------
DNA (1125bp)
protein (375aa)
ATP synthase A1 subunit C; K02119 V-type H+-transporting ATPase subunit C [EC:3.6.3.14] id=5042343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
V-type ATP synthase subunit C
rifcsphigho2_02_scaffold_13590_7

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4376..4714
-----------------
DNA (339bp)
protein (113aa)
V-type ATP synthase subunit F; K02122 V-type H+-transporting ATPase subunit F [EC:3.6.3.14] id=5042342 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Vacuolar H+transporting two-sector ATPase F subunit
rifcsphigho2_02_scaffold_13590_8

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4867..6621
-----------------
DNA (1755bp)
protein (585aa)
ATP synthase subunit A (EC:3.6.3.14); K02117 V-type H+-transporting ATPase subunit A [EC:3.6.3.14] id=5044034 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=1579366 species="Archaea.
atpA-1; A-type ATP synthase subunit A (EC:3.6.3.14)
rifcsphigho2_02_scaffold_13590_9
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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6659..7129
-----------------
DNA (471bp)
protein (157aa)
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Putative uncharacterized protein id=4326321 bin=GWC2_Deltaproteobacteria_42_51 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
rifcsphigho2_02_scaffold_13590_10
AR15, Woesearchaeaota, DPANN, Archaea

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7158..8558
-----------------
DNA (1401bp)
protein (467aa)
V-type ATP synthase beta chain id=5800554 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
V-type ATP synthase beta chain Tax=AR15
V-type ATP synthase subunit B
rifcsphigho2_02_scaffold_13590_11

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8617..9261
-----------------
DNA (645bp)
protein (215aa)
V-type ATPase subunit D; K02120 V-type H+-transporting ATPase subunit D [EC:3.6.3.14] id=5042339 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
atpD-1; A-type ATP synthase subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_13590_12
unknown

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9311..9505
-----------------
DNA (195bp)
protein (65aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13590_13
unknown

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comp(9565..10578)
-----------------
DNA (1014bp)
protein (338aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13590_14
unknown

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comp(10575..11198)
-----------------
DNA (624bp)
protein (208aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13590_15
unknown

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comp(11146..12492)
-----------------
DNA (1347bp)
protein (449aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13590_16
unknown

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12944..13168
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsphigho2_02_scaffold_13590_17
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

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13175..14326
-----------------
DNA (1152bp)
protein (384aa)
NAD(P)-binding Rossmann-like domain protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVA5_9EURY
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
hypothetical protein
rifcsphigho2_02_scaffold_13590_18
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(14347..14799)
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=CG_Woesearch_01
NusA family KH domain-containing protein
rifcsphigho2_02_scaffold_13590_19
unknown

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comp(14847..15137)
-----------------
DNA (291bp)
protein (97aa)
50S ribosomal protein L30e n=12 Tax=Sulfolobus RepID=RL30E_SULSO id=5103775 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30e n=12 Tax=Sulfolobus RepID=RL30E_SULSO Tax=AR20
50S ribosomal protein L30e
rifcsphigho2_02_scaffold_13590_20
AR11, Woesearchaeaota, DPANN, Archaea

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comp(15319..16449)
-----------------
DNA (1131bp)
protein (377aa)
DNA-directed RNA polymerase subunit A'' Tax=AR11
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit A''
rifcsphigho2_02_scaffold_13590_21

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comp(16518..19094)
-----------------
DNA (2577bp)
protein (859aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsphigho2_02_scaffold_13590_22

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comp(19173..20975)
-----------------
DNA (1803bp)
protein (601aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsphigho2_02_scaffold_13590_23

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comp(21120..21323)
-----------------
DNA (204bp)
protein (68aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000313|EMBL:KHO53417.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Displaying 23 items

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